RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 PRICKLE3O43900 615 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-207ENST00000397024 AVILO75366 819 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 NDUFS3O75489 264 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 VAPBO95292 243 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 AGXTP21549 392 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 CD9P21926 228 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 PGDP52209 483 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 SRSF1Q07955 248 aaKnown RBP eCLIP18.13■□□□□ 0.49
MCF2L-207ENST00000397024 ATP1A4Q13733 1029 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 NADK2Q4G0N4 442 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 CTSL3PQ5NE16 218 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 PAPD7Q5XG87 772 aaKnown RBP18.13■□□□□ 0.49
MCF2L-207ENST00000397024 UNC5DQ6UXZ4 953 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 DCUN1D3Q8IWE4 304 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 TRIM58Q8NG06 486 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 OR2L8Q8NGY9 312 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 MAIP1Q8WWC4 291 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 BIRC8Q96P09 236 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 EURLQ9NYK6 297 aa18.13■□□□□ 0.49
MCF2L-207ENST00000397024 RUVBL2Q9Y230 463 aaKnown RBP18.13■□□□□ 0.49
MCF2L-207ENST00000397024 NAV2Q8IVL1 2488 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 A6NL46 340 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 C9J4A7 227 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 ZSCAN9O15535 394 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-207ENST00000397024 KDM1AO60341 852 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 TPSB2P20231 275 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 RPS3P23396 243 aaKnown RBP eCLIP18.12■□□□□ 0.49
MCF2L-207ENST00000397024 GRIA3P42263 894 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 GCGRP47871 477 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 EIF3BP55884 814 aaKnown RBP18.12■□□□□ 0.49
MCF2L-207ENST00000397024 DCDP81605 110 aaKnown RBP18.12■□□□□ 0.49
MCF2L-207ENST00000397024 SLC9A5Q14940 896 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 TPSAB1Q15661 275 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 FCRL6Q6DN72 434 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 TTC27Q6P3X3 843 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 LRRC8BQ6P9F7 803 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 MCATQ8IVS2 390 aaKnown RBP18.12■□□□□ 0.49
MCF2L-207ENST00000397024 MPP5Q8N3R9 675 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 FDCSPQ8NFU4 85 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 TRIM56Q9BRZ2 755 aaKnown RBP18.12■□□□□ 0.49
MCF2L-207ENST00000397024 SLC22A11Q9NSA0 550 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 GALPQ9UBC7 116 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 SOX13Q9UN79 622 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 PPP2R2CQ9Y2T4 447 aa18.12■□□□□ 0.49
MCF2L-207ENST00000397024 CLEC18AA5D8T8 446 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 RASGRF2O14827 1237 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 C1orf105O95561 183 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 ITGAXP20702 1163 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 FMO4P31512 558 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 OTX2P32243 289 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 CD97P48960 835 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 VPS41P49754 854 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 CDK16Q00536 496 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 KCNJ11Q14654 390 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 TMED2Q15363 201 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 NKAIN1Q4KMZ8 207 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 ANKRD22Q5VYY1 191 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 TLDC1Q6P9B6 456 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 FIGLAQ6QHK4 219 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 CLEC18BQ6UXF7 455 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 LRRC6Q86X45 466 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 SPNS2Q8IVW8 549 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 CLEC18CQ8NCF0 446 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 LPGAT1Q92604 370 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 DHRS4Q9BTZ2 278 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 NUDT9Q9BW91 350 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 MRM3Q9HC36 420 aaKnown RBP18.11■□□□□ 0.49
MCF2L-207ENST00000397024 GNPTGQ9UJJ9 305 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 SLC39A10Q9ULF5 831 aa18.11■□□□□ 0.49
MCF2L-207ENST00000397024 PTRH2Q9Y3E5 179 aaKnown RBP18.11■□□□□ 0.49
MCF2L-207ENST00000397024 USP9YO00507 2555 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-207ENST00000397024 MASP2O00187 686 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 AP3B1O00203 1094 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 NIPSNAP2O75323 286 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 RPN2P04844 631 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 MCM3P25205 808 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 BDKRB1P46663 353 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 UBAP2LQ14157 1087 aaKnown RBP18.1■□□□□ 0.49
MCF2L-207ENST00000397024 SF1Q15637 639 aaKnown RBP18.1■□□□□ 0.49
MCF2L-207ENST00000397024 MED25Q71SY5 747 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 OTOAQ7RTW8 1153 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 CAND1Q86VP6 1230 aaKnown RBP18.1■□□□□ 0.49
MCF2L-207ENST00000397024 OTUD6BQ8N6M0 293 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 TMEM102Q8N9M5 508 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-207ENST00000397024 PROKR1Q8TCW9 393 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 DENND1AQ8TEH3 1009 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 FAM136AQ96C01 138 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 MS4A14Q96JA4 679 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 PANX3Q96QZ0 392 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 HOMER3Q9NSC5 361 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 IRAK4Q9NWZ3 460 aa18.1■□□□□ 0.49
MCF2L-207ENST00000397024 IFT80Q9P2H3 777 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-207ENST00000397024 TSR3Q9UJK0 312 aaKnown RBP18.1■□□□□ 0.49
MCF2L-207ENST00000397024 S1PR4O95977 384 aa18.09■□□□□ 0.49
MCF2L-207ENST00000397024 F7P08709 466 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-207ENST00000397024 PSMB5P28074 263 aa18.09■□□□□ 0.49
MCF2L-207ENST00000397024 MAGEA6P43360 314 aa18.09■□□□□ 0.49
MCF2L-207ENST00000397024 YBX1P67809 324 aaKnown RBP18.09■□□□□ 0.49
MCF2L-207ENST00000397024 GPS1Q13098 491 aa18.09■□□□□ 0.49
MCF2L-207ENST00000397024 RAPSNQ13702 412 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms