RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 PLCL2Q9UPR0 1127 aa18.66■□□□□ 0.58
CDKN1B-202ENST00000396340 DHRS7Q9Y394 339 aa18.66■□□□□ 0.58
CDKN1B-202ENST00000396340 UTP11Q9Y3A2 253 aaKnown RBP18.66■□□□□ 0.58
CDKN1B-202ENST00000396340 SEC16AO15027 2179 aa18.66■□□□□ 0.58
CDKN1B-202ENST00000396340 LOC101059948A0A1B0GTJ6 334 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 PABPN1LA6NDY0 278 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 CCNDBP1O95273 360 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 RAB40ALP0C0E4 278 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 MPC1LP0DKB6 136 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 OAS2P29728 719 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 SLC1A2P43004 574 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 CCR10P46092 362 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 ARSFP54793 590 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 CKAP4Q07065 602 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 DHX9Q08211 1270 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 CTBP1Q13363 440 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 KCNAB1Q14722 419 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 SF1Q15637 639 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 GPR19Q15760 415 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 BBS9Q3SYG4 887 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 HSP90AA5PQ58FG0 334 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 TCTE1Q5JU00 501 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 NAPRTQ6XQN6 538 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 VRK3Q8IV63 474 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 C2CD4AQ8NCU7 369 aaPredicted RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 PROKR1Q8TCW9 393 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 DHRS4Q9BTZ2 278 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 ACTR5Q9H9F9 607 aaPredicted RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 PPANQ9NQ55 473 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 WHRNQ9P202 907 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 ANKMY1Q9P2S6 941 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 PADI2Q9Y2J8 665 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 SNRNP200O75643 2136 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 COL6A6A6NMZ7 2263 aa18.65■□□□□ 0.58
CDKN1B-202ENST00000396340 EIF3HO15372 352 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 TTI1O43156 1089 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 NIPSNAP2O75323 286 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 PSIP1O75475 530 aaKnown RBP18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 OR2B3O76000 313 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 PIM1P11309 404 aaPredicted RBP18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 CLCN7P51798 805 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 CDC20Q12834 499 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 KLHL38Q2WGJ6 581 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 CNSTQ6PJW8 725 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 ZNF517Q6ZMY9 492 aaPredicted RBP18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 SYVN1Q86TM6 617 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 LMNTD1Q8N9Z9 388 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 SPATA4Q8NEY3 305 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 OR9A1PQ8NGU1 263 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 LKAAEAR1Q8TD35 194 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 APOBEC4Q8WW27 367 aaKnown RBP18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 THAP4Q8WY91 577 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 PHACTR1Q9C0D0 580 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 IL1RAPL1Q9NZN1 696 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 TRMT6Q9UJA5 497 aaKnown RBP18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 CROTQ9UKG9 612 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 KLK4Q9Y5K2 254 aa18.64■□□□□ 0.57
CDKN1B-202ENST00000396340 C9J4A7 227 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 KIF2AO00139 706 aaPredicted RBP18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 MEN1O00255 615 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 SRPX2O60687 465 aaPredicted RBP18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 ZNF28P17035 718 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 PTPN4P29074 926 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 ITGA8P53708 1063 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 DNASE1L3Q13609 305 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 CYP2A13Q16696 494 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 KIAA1614Q5VZ46 1190 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 DENND6AQ8IWF6 608 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 SMPDL3AQ92484 453 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 IP6K3Q96PC2 410 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 KRT12Q99456 494 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 ERP44Q9BS26 406 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 AARSD1Q9BTE6 412 aaKnown RBP18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 MENTQ9BUN1 341 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 NLNQ9BYT8 704 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 FBXO6Q9NRD1 293 aaPredicted RBP18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 IARS2Q9NSE4 1012 aaKnown RBP18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 TXLNGQ9NUQ3 528 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 POLHQ9Y253 713 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 TEX264Q9Y6I9 313 aa18.63■□□□□ 0.57
CDKN1B-202ENST00000396340 LOC400499M0QZD8 3231 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 MYO1CO00159 1063 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 CREG1O75629 220 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 NTRK1P04629 796 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 C8GP07360 202 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 HRH2P25021 359 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 CMPK1P30085 196 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 SP140Q13342 867 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 FAM214AQ32MH5 1076 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 RHBDD2Q6NTF9 364 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 CDHR3Q6ZTQ4 885 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 CEP128Q6ZU80 1094 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 SLC26A11Q86WA9 606 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 DSELQ8IZU8 1212 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 MCOLN3Q8TDD5 553 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 CDKL2Q92772 493 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 MR1Q95460 341 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 NDC1Q9BTX1 674 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 ENAMQ9NRM1 1142 aa18.62■□□□□ 0.57
CDKN1B-202ENST00000396340 SPHK1Q9NYA1 384 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms