RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 S100A2P29034 98 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 OXTRP30559 389 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ARCN1P48444 511 aaKnown RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CPT1AP50416 773 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GP2P55259 537 aaKnown RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 HSD17B7P56937 341 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 NKX3-2P78367 333 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ATF7IP2Q5U623 682 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 MZT2AQ6P582 158 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GCNT7Q6ZNI0 430 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 RTL4Q6ZR62 310 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 SPRED1Q7Z699 444 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TAF8Q7Z7C8 310 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PDZD9Q8IXQ8 264 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 FTMTQ8N4E7 242 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TMC2Q8TDI7 906 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TCTEX1D2Q8WW35 142 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 LRRC58Q96CX6 371 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 STRA6Q9BX79 667 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 SLC19A3Q9BZV2 496 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 REEP1Q9H902 201 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 OXSMQ9NWU1 459 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 COMMD3Q9UBI1 195 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CMAHPQ9Y471 501 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ALG5Q9Y673 324 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 MYH14Q7Z406 1995 aaKnown RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 IRS2Q9Y4H2 1338 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 A0A0X1KG70 313 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 FAM159BA6NKW6 160 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF487B1APH4 448 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PEX10O60683 326 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 DGAT1O75907 488 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 S100A8P05109 93 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 HEXBP07686 556 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 FHP07954 510 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 SERPINF2P08697 491 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 SYN1P17600 705 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CD53P19397 219 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CPN2P22792 545 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GNPDA1P46926 289 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TKTL1P51854 596 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 RNF4P78317 190 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GCNT1Q02742 428 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CREB5Q02930 508 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TTLL4Q14679 1199 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 NOMO2Q5JPE7 1267 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 SPANXN3Q5MJ09 141 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 LRRC66Q68CR7 880 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 C3orf33Q6P1S2 294 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 FAM171BQ6P995 826 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ANKS3Q6ZW76 656 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PRSS48Q7RTY5 328 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 MAVSQ7Z434 540 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CUZD1Q86UP6 607 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TMEM17Q86X19 198 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GPC2Q8N158 579 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 KIAA1958Q8N8K9 716 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 OR5K1Q8NHB7 308 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 UPF1Q92900 1129 aaKnown RBP eCLIP7.47□□□□□ -1.218e-7■■■■■ 27.8
VTI1A-201ENST00000393077 NXPE2Q96DL1 559 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PARK7Q99497 189 aaKnown RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 APOL2Q9BQE5 337 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ASPNQ9BXN1 380 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PXMP2Q9NR77 195 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ANKEF1Q9NU02 776 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ABCD2Q9UBJ2 740 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PRKAB1Q9Y478 270 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 RIPK3Q9Y572 518 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 NHSL1Q5SYE7 1610 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 C1orf196B1AJZ1 125 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 NFKBIEO00221 500 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 XPAP23025 273 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 DNAJB1P25685 340 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 MAPK1P28482 360 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 DPP6P42658 865 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CCR10P46092 362 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ARFIP1P53367 373 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GMFBP60983 142 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 RRAS2P62070 204 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 SLC10A2Q12908 348 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 FADDQ13158 208 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 SP140Q13342 867 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 BAK1Q16611 211 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 GPRC6AQ5T6X5 926 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 LCN8Q6JVE9 175 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PGBD2Q6P3X8 592 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 ZCCHC12Q6PEW1 402 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 LRRTM3Q86VH5 581 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 KCNMB4Q86W47 210 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 TCTE3Q8IZS6 198 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 RBFAQ8N0V3 343 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 OR1M1Q8NGA1 313 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 OR6S1Q8NH40 331 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 PPM1MQ96MI6 270 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 MID1IP1Q9NPA3 183 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 C14orf105Q9NVL8 296 aa7.47□□□□□ -1.21
VTI1A-201ENST00000393077 U3KQ87 197 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms