RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 LMOD3Q0VAK6 560 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 ELAVL2Q12926 359 aaKnown RBP2.74□□□□□ -1.97
TRAV40-201ENST00000390467 TAF10Q12962 218 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 NR1D2Q14995 579 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 RAB41Q5JT25 222 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 C20orf194Q5TEA3 1177 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 FAM180BQ6P0A1 224 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 CATSPERDQ86XM0 798 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 AFAP1Q8N556 730 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 AQP11Q8NBQ7 271 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 OR1L3Q8NH93 324 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 ARHGAP45Q92619 1136 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 SAT2Q96F10 170 aaPredicted RBP2.74□□□□□ -1.97
TRAV40-201ENST00000390467 NECTIN4Q96NY8 510 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 NEK1Q96PY6 1258 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 PAFAH2Q99487 392 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 URM1Q9BTM9 101 aaKnown RBP2.74□□□□□ -1.97
TRAV40-201ENST00000390467 PITPNM3Q9BZ71 974 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 TRIM6Q9C030 488 aaPredicted RBP2.74□□□□□ -1.97
TRAV40-201ENST00000390467 Q9N2K0 584 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 SERINC1Q9NRX5 453 aa2.74□□□□□ -1.97
TRAV40-201ENST00000390467 ZNF541Q9H0D2 1346 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 TMEM221A6NGB7 291 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 AGAP14A8MT82 685 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 MPTX1A8MV57 137 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 SRRM5B3KS81 715 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 VILLO15195 856 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 EPB41L2O43491 1005 aaKnown RBP2.73□□□□□ -1.97
TRAV40-201ENST00000390467 PRAMEF11O60813 436 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 AVILO75366 819 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 TOMM70O94826 608 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 DARSP14868 501 aaKnown RBP2.73□□□□□ -1.97
TRAV40-201ENST00000390467 RPL21P46778 160 aaKnown RBP2.73□□□□□ -1.97
TRAV40-201ENST00000390467 GUCY2DQ02846 1103 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 PAX8Q06710 450 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 AIMP2Q13155 320 aaKnown RBP2.73□□□□□ -1.97
TRAV40-201ENST00000390467 FASTKD3Q14CZ7 662 aaKnown RBP2.73□□□□□ -1.97
TRAV40-201ENST00000390467 TNIP1Q15025 636 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 CCDC70Q6NSX1 233 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 TBC1D1Q86TI0 1168 aaPredicted RBP2.73□□□□□ -1.97
TRAV40-201ENST00000390467 GPRC5AQ8NFJ5 357 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 OR2L2Q8NH16 312 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 C11orf45Q8TAV5 145 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 GATAD1Q8WUU5 269 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 CDRT15Q96T59 188 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 RAD9AQ99638 391 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 SMARCAD1Q9H4L7 1026 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 SPHK1Q9NYA1 384 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 OR6C2Q9NZP2 312 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 MUTYHQ9UIF7 546 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 STUB1Q9UNE7 303 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 TNNQ9UQP3 1299 aa2.73□□□□□ -1.97
TRAV40-201ENST00000390467 WBP11Q9Y2W2 641 aaKnown RBP2.73□□□□□ -1.97
TRAV40-201ENST00000390467 ENO4A6NNW6 628 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 B4DLN1 442 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 PI4K2BG5E9Z4 385 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 CTDSP2O14595 271 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 CREB3O43889 395 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 OR2T7P0C7T2 308 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 DNAH10OSP0CZ25 163 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 TRIM21P19474 475 aaKnown RBP2.72□□□□□ -1.97
TRAV40-201ENST00000390467 TNFAIP3P21580 790 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 CDH3P22223 829 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 PRKACGP22612 351 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 LHCGRP22888 699 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 JAK1P23458 1154 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 PSMB10P40306 273 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 MRPL12P52815 198 aaKnown RBP2.72□□□□□ -1.97
TRAV40-201ENST00000390467 LBX1P52954 281 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 LIMK2P53671 638 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 CSNK2BP67870 215 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 MTF1Q14872 753 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 CA9Q16790 459 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 MOGAT2Q3SYC2 334 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 FAAH2Q6GMR7 532 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 TMEM211Q6ICI0 200 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 RSRC2Q7L4I2 434 aaKnown RBP2.72□□□□□ -1.97
TRAV40-201ENST00000390467 TMPRSS11BQ86T26 416 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 KBTBD6Q86V97 674 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 C17orf47Q8NEP4 570 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 CCDC107Q8WV48 283 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 HDAC2Q92769 488 aaKnown RBP2.72□□□□□ -1.97
TRAV40-201ENST00000390467 GKN1Q9NS71 199 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 FAM207AQ9NSI2 230 aaPredicted RBP2.72□□□□□ -1.97
TRAV40-201ENST00000390467 ARHGEF38Q9NXL2 777 aa2.72□□□□□ -1.97
TRAV40-201ENST00000390467 SUCLA2Q9P2R7 463 aaPredicted RBP2.72□□□□□ -1.97
TRAV40-201ENST00000390467 A0A1W2PNU3 283 aaPredicted RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 AP3D1O14617 1153 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 ADAMDEC1O15204 470 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 GLRA3O75311 464 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 BCL10O95999 233 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 IGHV3-13P01766 116 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 KRTAP1-4P0C5Y4 121 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 MNDAP41218 407 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 ARF3P61204 181 aaPredicted RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 ARF1P84077 181 aaKnown RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 CYCSP99999 105 aaKnown RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 MAT1AQ00266 395 aaKnown RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 ODF4Q2M2E3 257 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms