RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ACAD11Q709F0 780 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 DDIASQ8IXT1 998 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 TBC1D21Q8IYX1 336 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 MFSD2AQ8NA29 543 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 CCT6BQ92526 530 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 PRR11Q96HE9 360 aaPredicted RBP26.04■■□□□ 1.76
MSX1-201ENST00000382723 NRTNQ99748 197 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 NMUR2Q9GZQ4 415 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 TM9SF3Q9HD45 589 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 E9PBE3 544 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 SDHDO14521 159 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 FCHO1O14526 889 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 PIP5K1BO14986 540 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 KLHL41O60662 606 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 EML2O95834 649 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 CAPN1P07384 714 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 PNLIPRP1P54315 467 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 RACK1P63244 317 aaKnown RBP26.04■■□□□ 1.76
MSX1-201ENST00000382723 TCHHL1Q5QJ38 904 aaPredicted RBP26.04■■□□□ 1.76
MSX1-201ENST00000382723 CCDC121Q6ZUS5 278 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 C2orf73Q8N5S3 287 aaPredicted RBP26.04■■□□□ 1.76
MSX1-201ENST00000382723 OR56A3Q8NH54 315 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 METTL6Q8TCB7 284 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 C19orf60Q96EN9 201 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 ACTR8Q9H981 624 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 MEAF6Q9HAF1 191 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 RNF11Q9Y3C5 154 aa26.04■■□□□ 1.76
MSX1-201ENST00000382723 HOXA6P31267 233 aa26.03■■□□□ 1.76
MSX1-201ENST00000382723 HALP42357 657 aa26.03■■□□□ 1.76
MSX1-201ENST00000382723 ILF3Q12906 894 aaKnown RBP eCLIP26.03■■□□□ 1.76
MSX1-201ENST00000382723 FASTKQ14296 549 aaKnown RBP26.03■■□□□ 1.76
MSX1-201ENST00000382723 RPE65Q16518 533 aa26.03■■□□□ 1.76
MSX1-201ENST00000382723 LSM12Q3MHD2 195 aaKnown RBP26.03■■□□□ 1.76
MSX1-201ENST00000382723 NRROSQ86YC3 692 aa26.03■■□□□ 1.76
MSX1-201ENST00000382723 NTMT1Q9BV86 223 aa26.03■■□□□ 1.76
MSX1-201ENST00000382723 TUBB1Q9H4B7 451 aa26.03■■□□□ 1.76
MSX1-201ENST00000382723 PRMT8Q9NR22 394 aaPredicted RBP26.03■■□□□ 1.76
MSX1-201ENST00000382723 A0A1W2PR77 199 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 CHEK2O96017 543 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 HGFP14210 728 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 TBPL1P62380 186 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 SCIMPQ6UWF3 145 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 PARGQ86W56 976 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 ATP6AP2A0A1C7CYW4 349 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 ATP6AP2O75787 350 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 LINC00032P0C843 101 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 EBLN1P0CF75 366 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 NCF2P19878 526 aaPredicted RBP26.02■■□□□ 1.76
MSX1-201ENST00000382723 CSTF1Q05048 431 aaKnown RBP26.02■■□□□ 1.76
MSX1-201ENST00000382723 CDC16Q13042 620 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 SUSD1Q6UWL2 747 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 CLNKQ7Z7G1 428 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 C3orf30Q96M34 536 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 OR4K3Q96R72 315 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 NUSAP1Q9BXS6 441 aaKnown RBP26.02■■□□□ 1.76
MSX1-201ENST00000382723 ARMCX1Q9P291 453 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 LNPEPQ9UIQ6 1025 aa26.02■■□□□ 1.76
MSX1-201ENST00000382723 MUC3AQ02505 3323 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 CCDC163A0A0D9SF12 145 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 PRAMEF33A0A0G2JMD5 474 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 E7ENX8 843 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 FFAR3O14843 346 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 GPR42O15529 346 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 KIAA0754O94854 1291 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 UBOX5O94941 541 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 CLDN9O95484 217 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 HMOX2P30519 316 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 INHBCP55103 352 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 TAP2Q03519 686 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 CAPN13Q6MZZ7 669 aaPredicted RBP26.01■■□□□ 1.75
MSX1-201ENST00000382723 DCP2Q8IU60 420 aaKnown RBP26.01■■□□□ 1.75
MSX1-201ENST00000382723 KLHDC8AQ8IYD2 350 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 PHACTR4Q8IZ21 702 aa26.01■■□□□ 1.75
MSX1-201ENST00000382723 MAELQ96JY0 434 aaKnown RBP26.01■■□□□ 1.75
MSX1-201ENST00000382723 DUSP15Q9H1R2 295 aaPredicted RBP26.01■■□□□ 1.75
MSX1-201ENST00000382723 TRBV23OR9-2A0A075B6M9 112 aa26■■□□□ 1.75
MSX1-201ENST00000382723 TLR4O00206 839 aa26■■□□□ 1.75
MSX1-201ENST00000382723 CCDC22O60826 627 aa26■■□□□ 1.75
MSX1-201ENST00000382723 CTSEP14091 401 aa26■■□□□ 1.75
MSX1-201ENST00000382723 ABRAXAS1Q6UWZ7 409 aa26■■□□□ 1.75
MSX1-201ENST00000382723 C1orf210Q8IVY1 113 aa26■■□□□ 1.75
MSX1-201ENST00000382723 CAMK1GQ96NX5 476 aa26■■□□□ 1.75
MSX1-201ENST00000382723 G3BP2Q9UN86 482 aaKnown RBP26■■□□□ 1.75
MSX1-201ENST00000382723 TECTAO75443 2155 aa26■■□□□ 1.75
MSX1-201ENST00000382723 ENO1P06733 434 aaKnown RBP26■■□□□ 1.75
MSX1-201ENST00000382723 SERPINA6P08185 405 aa26■■□□□ 1.75
MSX1-201ENST00000382723 CELA2BP08218 269 aaPredicted RBP26■■□□□ 1.75
MSX1-201ENST00000382723 MTHFD1P11586 935 aaKnown RBP26■■□□□ 1.75
MSX1-201ENST00000382723 TDGF1P13385 188 aa26■■□□□ 1.75
MSX1-201ENST00000382723 SRSF5Q13243 272 aaKnown RBP26■■□□□ 1.75
MSX1-201ENST00000382723 SPDYAQ5MJ70 313 aa26■■□□□ 1.75
MSX1-201ENST00000382723 EFL1Q7Z2Z2 1120 aaKnown RBP26■■□□□ 1.75
MSX1-201ENST00000382723 IQCHQ86VS3 1027 aa26■■□□□ 1.75
MSX1-201ENST00000382723 WDR5BQ86VZ2 330 aa26■■□□□ 1.75
MSX1-201ENST00000382723 PHF6Q8IWS0 365 aaKnown RBP eCLIP26■■□□□ 1.75
MSX1-201ENST00000382723 LRRC56Q8IYG6 542 aaPredicted RBP26■■□□□ 1.75
MSX1-201ENST00000382723 CCDC28BQ9BUN5 200 aa26■■□□□ 1.75
MSX1-201ENST00000382723 TRPS1Q9UHF7 1281 aa26■■□□□ 1.75
MSX1-201ENST00000382723 HTR6P50406 440 aa25.99■■□□□ 1.75
MSX1-201ENST00000382723 C1orf61Q13536 156 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms