RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 COL26A1Q96A83 441 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 KLHL25Q9H0H3 589 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 IRAK4Q9NWZ3 460 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 GPR83Q9NYM4 423 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 IFT80Q9P2H3 777 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-202ENST00000381208 SLC2A6Q9UGQ3 507 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 PLAAQ9Y263 795 aa12.52□□□□□ -0.41
RPAIN-202ENST00000381208 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 H3BMH7 237 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 CD3EAPO15446 510 aaKnown RBP12.51□□□□□ -0.41
RPAIN-202ENST00000381208 PDGFAP04085 211 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 ALPPP05187 535 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 CD9P21926 228 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 RPS3P23396 243 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPAIN-202ENST00000381208 FOLR3P41439 243 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 GRIA1P42261 906 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 GABRA4P48169 554 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 MLLT10P55197 1068 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 SNX1Q13596 522 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 NAA25Q14CX7 972 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 ZIC1Q15915 447 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 RNF187Q5TA31 235 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-202ENST00000381208 MEI1Q5TIA1 1274 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 MLIPQ5VWP3 458 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 PTRHD1Q6GMV3 140 aaKnown RBP12.51□□□□□ -0.41
RPAIN-202ENST00000381208 SDCCAG8Q86SQ7 713 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-202ENST00000381208 TRIM73Q86UV7 250 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 CLEC1AQ8NC01 280 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 OR2Y1Q8NGV0 311 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 FLVCR1-AS1Q8TAF5 88 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 CPT1CQ8TCG5 803 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 MAGEC3Q8TD91 643 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 PTERQ96BW5 349 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 ZNF778Q96MU6 729 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 FOPNLQ96NB1 174 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 MRM3Q9HC36 420 aaKnown RBP12.51□□□□□ -0.41
RPAIN-202ENST00000381208 FAM60AQ9NP50 221 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 SPHK1Q9NYA1 384 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 SLC39A10Q9ULF5 831 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 MED13Q9UHV7 2174 aa12.51□□□□□ -0.41
RPAIN-202ENST00000381208 H3BMM5 538 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 NRDCO43847 1150 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 NDUFS3O75489 264 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 IPO13O94829 963 aaKnown RBP12.5□□□□□ -0.41
RPAIN-202ENST00000381208 AOAHP28039 575 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 RPL22P35268 128 aaKnown RBP12.5□□□□□ -0.41
RPAIN-202ENST00000381208 CCNFP41002 786 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 SARNPP82979 210 aaKnown RBP12.5□□□□□ -0.41
RPAIN-202ENST00000381208 CHAF1BQ13112 559 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 NKAIN1Q4KMZ8 207 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 TCTE1Q5JU00 501 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 VWA5B1Q5TIE3 1220 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 MRNIPQ6NTE8 343 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 OTOAQ7RTW8 1153 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 MRGPREQ86SM8 312 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 ZNF655Q8N720 491 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-202ENST00000381208 FDCSPQ8NFU4 85 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 TRIM58Q8NG06 486 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 OR2L8Q8NGY9 312 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 ZUFSPQ96AP4 578 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 RAD51AP1Q96B01 352 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 VPS50Q96JG6 964 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 SMAD5Q99717 465 aaKnown RBP12.5□□□□□ -0.41
RPAIN-202ENST00000381208 SPRTNQ9H040 489 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-202ENST00000381208 SLAMF7Q9NQ25 335 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 CHRAC1Q9NRG0 131 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 ENAMQ9NRM1 1142 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 TREX1Q9NSU2 369 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 EURLQ9NYK6 297 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 IL1RAPL1Q9NZN1 696 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-202ENST00000381208 CDYLQ9Y232 598 aa12.5□□□□□ -0.41
RPAIN-202ENST00000381208 SPTBN1Q01082 2364 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 TARM1B6A8C7 271 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 RASGRF2O14827 1237 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 KLF7O75840 302 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 SORBS2O94875 1100 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 ALBP02768 609 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 CCDC175P0C221 793 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 TPBGLP0DKB5 382 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 CBSLP0DN79 551 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 OTX2P32243 289 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 CBSP35520 551 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 CSE1LP55060 971 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 BASP1P80723 227 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 ATP1A4Q13733 1029 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 DEFB110Q30KQ9 67 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 NAPRTQ6XQN6 538 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 MCATQ8IVS2 390 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 TM9SF4Q92544 642 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 PNPLA2Q96AD5 504 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 TCF12Q99081 682 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 NRTNQ99748 197 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 SLC29A3Q9BZD2 475 aa12.49□□□□□ -0.41
RPAIN-202ENST00000381208 NXT1Q9UKK6 140 aaKnown RBP12.49□□□□□ -0.41
RPAIN-202ENST00000381208 PLAGL1Q9UM63 463 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms