RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 UROSP10746 265 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 HLA-DPA1P20036 260 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 CA5AP35218 305 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 ZNF157P51786 506 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 SKIV2LQ15477 1246 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 MAPKAPK3Q16644 382 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 ZFP69Q49AA0 526 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 THAP5Q7Z6K1 395 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 C10orf111Q8N326 155 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 C2orf69Q8N8R5 385 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 B3GNT4Q9C0J1 378 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 C6orf62Q9GZU0 229 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 CLPBQ9H078 707 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 WWOXQ9NZC7 414 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 AGO1Q9UL18 857 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 PDE10AQ9Y233 779 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 hCG_2039718K7EN88 272 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 ANXA6P08133 673 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 RHOCP08134 193 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 FGF4P08620 206 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 ALOX12P18054 663 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 SERPINB10P48595 397 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 ERVK-8P63133 956 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 IL10RBQ08334 325 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 CDK10Q15131 360 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 KCNA10Q16322 511 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 SMN1Q16637 294 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 CTU2Q2VPK5 515 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 ARTNQ5T4W7 220 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 SULT1C3Q6IMI6 304 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 RBM23Q86U06 439 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 HID1Q8IV36 788 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 C8orf59Q8N0T1 100 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 LEMD2Q8NC56 503 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 WBP2Q969T9 261 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 MUL1Q969V5 352 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 BARD1Q99728 777 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 LRRC3Q9BY71 257 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 REXO4Q9GZR2 422 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 PAK1IP1Q9NWT1 392 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 EIF3LQ9Y262 564 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 NINQ8N4C6 2090 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 TCRBV5S2A0A599 114 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 AKR1A1P14550 325 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 PSMB9P28065 219 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 ZNF33AQ06730 810 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 TXNDC11Q6PKC3 985 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 TMEM179BQ7Z7N9 219 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 LIX1Q8N485 282 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 OR6F1Q8NGZ6 308 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 PKMYT1Q99640 499 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 TRIM54Q9BYV2 358 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 DPY30Q9C005 99 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 C12orf4Q9NQ89 552 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 HPS4Q9NQG7 708 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 CDH23Q9H251 3354 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 LCHNA4D1U4 455 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 CENPXA8MT69 81 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 INSIG1O15503 277 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 TPPPO94811 219 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 IFI30P13284 250 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 LPOP22079 712 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 HOXC13P31276 330 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 ZXDBP98169 803 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 COL9A2Q14055 689 aaPredicted RBP12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 DAG1Q14118 895 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 Q5BKY6 102 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 CTSL3PQ5NE16 218 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 SLX4IPQ5VYV7 408 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 NXNL2Q5VZ03 156 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 GOLGA7Q7Z5G4 137 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 LSMEM1Q8N8F7 131 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 OMA1Q96E52 524 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 OR52E6Q96RD3 313 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 TRIM62Q9BVG3 475 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 ACTR8Q9H981 624 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 QPCTLQ9NXS2 382 aa12.18□□□□□ -0.46
PRPF40B-202ENST00000380281 E2F3O00716 465 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 TBC1D4O60343 1298 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 PAPSS2O95340 614 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 PFKLP17858 780 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 CD47Q08722 323 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 EIF4EBP2Q13542 120 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 GTF2H2Q13888 395 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 NPTX1Q15818 432 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 C6orf141Q5SZD1 244 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 AFMIDQ63HM1 303 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 GTF2H2CQ6P1K8 395 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 ANGPTL8Q6UXH0 198 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 HACD2Q6Y1H2 254 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 OR5H6Q8NGV6 325 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 MCFD2Q8NI22 146 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 LKAAEAR1Q8TD35 194 aa12.17□□□□□ -0.46
PRPF40B-202ENST00000380281 CD200R1Q8TD46 325 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms