RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CD3EAPO15446 510 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SNNO75324 88 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 MPOP05164 745 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 NR2C1P13056 603 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 HLA-EP13747 358 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 TMEM11P17152 192 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CRHBPP24387 322 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 GRIA4P48058 902 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CRY2Q49AN0 593 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 PGBD2Q6P3X8 592 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 PAMR1Q6UXH9 720 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 LIPIQ6XZB0 460 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 RTL4Q6ZR62 310 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 GAL3ST3Q96A11 431 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CREB3L1Q96BA8 519 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 NXPE2Q96DL1 559 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 RDH12Q96NR8 316 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 MYOZ2Q9NPC6 264 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 PTTG3PQ9NZH4 202 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 ANKRD6Q9Y2G4 727 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 NKRFO15226 690 aaKnown RBP eCLIP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 DARSP14868 501 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CPT1AP50416 773 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 BACE1P56817 501 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CDC42EP1Q00587 391 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 AQP6Q13520 282 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 PON3Q15166 354 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 TSNQ15631 228 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 ADPRMQ3LIE5 342 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 TDRD10Q5VZ19 366 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 MZT2AQ6P582 158 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CDHR3Q6ZTQ4 885 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 MIER2Q8N344 545 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CMASQ8NFW8 434 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 HS6ST2Q96MM7 605 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SNTG1Q9NSN8 517 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 PIH1D1Q9NWS0 290 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SLCO3A1Q9UIG8 710 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SLC1A7O00341 560 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 PMPCBO75439 489 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 KRT33AO76009 404 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 IL1R2P27930 398 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 UGT2B10P36537 528 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 IFITM3Q01628 133 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 MC2RQ01718 297 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 BIKQ13323 160 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 LRRC66Q68CR7 880 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 TADA1Q96BN2 335 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 ROPN1LQ96C74 230 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 WDR77Q9BQA1 342 aaPredicted RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 ANKRA2Q9H9E1 313 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 ZBTB26Q9HCK0 441 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 LIPT1Q9Y234 373 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 RIPK3Q9Y572 518 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 PARP4Q9UKK3 1724 aaKnown RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 IGLV3-22A0A075B6J6 115 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 POM121BA6NF01 834 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 IPO13O94829 963 aaKnown RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 DPEP1P16444 411 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 MAPK1P28482 360 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 SLC3A1Q07837 685 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 LAPTM5Q13571 262 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 FAM171BQ6P995 826 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 ZCCHC12Q6PEW1 402 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 C11orf88Q6PI97 169 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 STRADAQ7RTN6 431 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 USP7Q93009 1102 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 SLC47A1Q96FL8 570 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 ACTR6Q9GZN1 396 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 NOBOXO60393 691 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 CYP2F1P24903 491 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 KLRC2P26717 231 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 NNMTP40261 264 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 MBLAC2Q68D91 279 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 ILDR2Q71H61 639 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 VSIG10LQ86VR7 867 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 SYNPOQ8N3V7 929 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 CNPPD1Q9BV87 410 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 NIFKQ9BYG3 293 aaKnown RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 SMURF1Q9HCE7 757 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 VSX1Q9NZR4 365 aaPredicted RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 SLC23A1Q9UHI7 598 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 LOC100130705A0A1B0GUX0 176 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 TCAPO15273 167 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 SNAPC5O75971 98 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 CYP11A1P05108 521 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 NFKB1P19838 968 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 PREPP48147 710 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 SGCAQ16586 387 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 CATSPEREQ5SY80 951 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 FKBP1CQ5VVH2 108 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 ZC3H3Q8IXZ2 948 aaKnown RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 DCP1BQ8IZD4 617 aaKnown RBP11.53□□□□□ -0.56
NPHP4-202ENST00000378161 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
NPHP4-202ENST00000378161 RNFT2Q96EX2 444 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms