RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 HMGB4Q8WW32 186 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 ARMC5Q96C12 935 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 PYCR2Q96C36 320 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 ZCCHC3Q9NUD5 404 aaKnown RBP18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 ZDHHC3Q9NYG2 299 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 DUXAA6NLW8 204 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 LIN52Q52LA3 116 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 PAQR3Q6TCH7 311 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 ABHD13Q7L211 337 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 TSTD1Q8NFU3 115 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 NTAN1Q96AB6 310 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 ZNF599Q96NL3 588 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 COPS4Q9BT78 406 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 CADM1Q9BY67 442 aaKnown RBP18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 POLR2J3Q9H1A7 115 aaKnown RBP18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 GKN1Q9NS71 199 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 FARSBQ9NSD9 589 aaKnown RBP18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 NRG3P56975 720 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 TRNAU1APQ9NX07 287 aaKnown RBP18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 TEX46H3BTG2 121 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 PDCD5O14737 125 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 NIPSNAP2O75323 286 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 SERPINA3P01011 423 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 ADAM8P78325 824 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 CARTPTQ16568 116 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 SATL1Q86VE3 508 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 RASGEF1AQ8N9B8 481 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 MTMR14Q8NCE2 650 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 TLCD1Q96CP7 247 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 TRMT61BQ9BVS5 477 aaKnown RBP18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 SEZ6LQ9BYH1 1024 aa18.62■□□□□ 0.57
TBC1D4-201ENST00000377625 TMEM131LA2VDJ0 1609 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 RPLP0P05388 317 aaKnown RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 ALPIP09923 528 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 PRMT2P55345 433 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 PDGFRLQ15198 375 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 ADGRF1Q5T601 910 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 GHDCQ8N2G8 530 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 SLC25A36Q96CQ1 311 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 IDNKQ5T6J7 187 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 MBLAC2Q68D91 279 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 MMAAQ8IVH4 418 aaKnown RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 GFM1Q96RP9 751 aaKnown RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 CLCA3PQ9Y6N3 262 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 S100A6P06703 90 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 IMPDH1P20839 514 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 AKR1D1P51857 326 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 TMEM44Q2T9K0 475 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 DCAKDQ8WVC6 231 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 NTPCRQ9BSD7 190 aaKnown RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 YIPF4Q9BSR8 244 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 COQ10BQ9H8M1 238 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 GRHL1Q9NZI5 618 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 FKBP7Q9Y680 259 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 TGFB1P01137 390 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 DGKEP52429 567 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 CEBPGP53567 150 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 KHDC1Q4VXA5 237 aaKnown RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 OXR1Q8N573 874 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 POMPQ9Y244 141 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 PCDHGB7Q9Y5F8 929 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 CSNK2A2P19784 350 aaPredicted RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 MAPK14Q16539 360 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 GPALPP1Q8IXQ4 340 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 NIPA2Q8N8Q9 360 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 LGR4Q9BXB1 951 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 TBL1XR1Q9BZK7 514 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 KAT8Q9H7Z6 458 aaKnown RBP18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 YIPF1Q9Y548 306 aa18.61■□□□□ 0.57
TBC1D4-201ENST00000377625 B4DGG1 531 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 SLC22A2O15244 555 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 LINGO2Q7L985 606 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 TTYH3Q9C0H2 523 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 VPS29Q9UBQ0 182 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 NR2E1Q9Y466 385 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 TMEM63AO94886 807 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 PRPS1L1P21108 318 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 SLC7A1P30825 629 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 GPM6BQ13491 265 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 CHERPQ8IWX8 916 aaKnown RBP18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 NAT14Q8WUY8 206 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 LRRC3Q9BY71 257 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 ELAC1Q9H777 363 aaKnown RBP18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 ITM2CQ9NQX7 267 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 TTC24A2A3L6 582 aaPredicted RBP18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 HAS3O00219 553 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 SGCBQ16585 318 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 ZNF613Q6PF04 617 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 TBX5Q99593 518 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 EFCAB11Q9BUY7 163 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 PMF1-BGLAPU3KQ54 211 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 CFIP05156 583 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 FCHO2Q0JRZ9 810 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 OGFOD2Q6N063 350 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 CAMK1GQ96NX5 476 aa18.6■□□□□ 0.57
TBC1D4-201ENST00000377625 KXD1Q9BQD3 176 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms