RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 FAM174BQ3ZCQ3 159 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 ZBED5Q49AG3 693 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 CCNYL2Q5T2Q4 361 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 ADGRD2Q7Z7M1 963 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 ZDHHC13Q8IUH4 622 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 ADHFE1Q8IWW8 467 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 RIMKLAQ8IXN7 391 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 RGL4Q8IZJ4 473 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 TDHQ8IZJ6 230 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 CMTM8Q8IZV2 173 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 CLEC4FQ8N1N0 589 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 CLDN19Q8N6F1 224 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 GPR26Q8NDV2 337 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 ZNF555Q8NEP9 628 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 MAGEE2Q8TD90 523 aaPredicted RBP11.94□□□□□ -0.5
UBR4-203ENST00000375225 GTF2H4Q92759 462 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 AURKBQ96GD4 344 aaPredicted RBP11.94□□□□□ -0.5
UBR4-203ENST00000375225 METTL2AQ96IZ6 378 aaKnown RBP11.94□□□□□ -0.5
UBR4-203ENST00000375225 OR52E6Q96RD3 313 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 OSBPL10Q9BXB5 764 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 SLC46A2Q9BY10 475 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 KCNH6Q9H252 994 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 ZDHHC6Q9H6R6 413 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 RPF2Q9H7B2 306 aaKnown RBP11.94□□□□□ -0.5
UBR4-203ENST00000375225 TBC1D14Q9P2M4 693 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 GMPR2Q9P2T1 348 aaKnown RBP11.94□□□□□ -0.5
UBR4-203ENST00000375225 DNAJB9Q9UBS3 223 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 BLOC1S6Q9UL45 172 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 ORC6Q9Y5N6 252 aa11.94□□□□□ -0.5
UBR4-203ENST00000375225 NUP210Q8TEM1 1887 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 WASH3PC4AMC7 463 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 PDLIM1O00151 329 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 ACOX3O15254 700 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 GPR39O43194 453 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 TRMUO75648 421 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 MYO1DO94832 1006 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 ATP1B2P14415 290 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 CDH2P19022 906 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 MAP4P27816 1152 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 VIPR1P32241 457 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 CCR2P41597 374 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 SPINT3P49223 89 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 CCR3P51677 355 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 DGKQP52824 942 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 TPD52P55327 224 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 MTPNP58546 118 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 ABRQ12979 859 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 TOP3AQ13472 1001 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 BOP1Q14137 746 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 KIAA0040Q15053 153 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 RFX4Q33E94 735 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 USP39Q53GS9 565 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 RUNDC3AQ59EK9 446 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 DGKKQ5KSL6 1271 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 ZNF697Q5TEC3 545 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 GDPD4Q6W3E5 623 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 GRASPQ7Z6J2 395 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 RALGPS2Q86X27 583 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 MICU2Q8IYU8 434 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 EID3Q8N140 333 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 ZNF420Q8TAQ5 688 aaPredicted RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 SMG7Q92540 1137 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 FIG4Q92562 907 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 TCEAL4Q96EI5 215 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 FAM120BQ96EK7 910 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 SLC47A1Q96FL8 570 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 RBM4BQ9BQ04 359 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 RBM4Q9BWF3 364 aaKnown RBP11.93□□□□□ -0.5
UBR4-203ENST00000375225 ACTL8Q9H568 366 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 DNAJC11Q9NVH1 559 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 ADGRE2Q9UHX3 823 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 MAN2B2Q9Y2E5 1009 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 CEPT1Q9Y6K0 416 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 ANKRD12Q6UB98 2062 aa11.93□□□□□ -0.5
UBR4-203ENST00000375225 EME2A4GXA9 379 aaPredicted RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 EVPLLA8MZ36 301 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 CXCR6O00574 342 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 SCAMP3O14828 347 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 PRSS23O95084 383 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 ASLP04424 464 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 THRBP10828 461 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 PABPC1P11940 636 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 XPAP23025 273 aaPredicted RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 MTHFRP42898 656 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 RPS6KA3P51812 740 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 PNLIPRP1P54315 467 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 ARSFP54793 590 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 CSTF3Q12996 717 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 GBX1Q14549 363 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 SGO1Q5FBB7 561 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 PRSS36Q5K4E3 855 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 RBM48Q5RL73 367 aaKnown RBP11.92□□□□□ -0.5
UBR4-203ENST00000375225 LIPJQ5W064 366 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 TSPAN33Q86UF1 283 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 DTWD1Q8N5C7 304 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 L3MBTL4Q8NA19 623 aa11.92□□□□□ -0.5
UBR4-203ENST00000375225 ZNF548Q8NEK5 533 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms