RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 GTPBP2Q9BX10 602 aaKnown RBP17.91■□□□□ 0.46
MMP9-201ENST00000372330 PRKD2Q9BZL6 878 aa17.91■□□□□ 0.46
MMP9-201ENST00000372330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.91■□□□□ 0.46
MMP9-201ENST00000372330 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
MMP9-201ENST00000372330 KCNE2Q9Y6J6 123 aa17.91■□□□□ 0.46
MMP9-201ENST00000372330 RETP07949 1114 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 MYL9P24844 172 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 TNFSF8P32971 234 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 KRT20P35900 424 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 ERVK-8P63133 956 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 ATP6AP1LQ52LC2 224 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 CYP4Z1Q86W10 505 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 PTGR2Q8N8N7 351 aaPredicted RBP17.9■□□□□ 0.46
MMP9-201ENST00000372330 B3GALNT2Q8NCR0 500 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 NPLOC4Q8TAT6 608 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 DNAJB3Q8WWF6 145 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 NDRG1Q92597 394 aaKnown RBP17.9■□□□□ 0.46
MMP9-201ENST00000372330 MYDGFQ969H8 173 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 CCDC120Q96HB5 630 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 ACOX2Q99424 681 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 RHNO1Q9BSD3 238 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 TTLL2Q9BWV7 592 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 NUSAP1Q9BXS6 441 aaKnown RBP17.9■□□□□ 0.46
MMP9-201ENST00000372330 TREX1Q9NSU2 369 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 UBP1Q9NZI7 540 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 AGO1Q9UL18 857 aaKnown RBP17.9■□□□□ 0.46
MMP9-201ENST00000372330 AP3M1Q9Y2T2 418 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 LOC100506127A0A0U1RQW1 187 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 CACNG3O60359 315 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 CRCPO75575 148 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 DNTTP04053 509 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 GLULP15104 373 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 ERCC2P18074 760 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 CBLP22681 906 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 SMN1Q16637 294 aaKnown RBP17.9■□□□□ 0.46
MMP9-201ENST00000372330 HECTD2Q5U5R9 776 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 TBL1YQ9BQ87 522 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 COPS4Q9BT78 406 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 DUSP16Q9BY84 665 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 PCM1Q15154 2024 aa17.9■□□□□ 0.46
MMP9-201ENST00000372330 PPP6CO00743 305 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 PLD2O14939 933 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 TFECO14948 347 aaPredicted RBP17.89■□□□□ 0.46
MMP9-201ENST00000372330 CD3EAPO15446 510 aaKnown RBP17.89■□□□□ 0.46
MMP9-201ENST00000372330 CA12O43570 354 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 MITFO75030 526 aaPredicted RBP17.89■□□□□ 0.46
MMP9-201ENST00000372330 ITGB6P18564 788 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 CFL1P23528 166 aaKnown RBP17.89■□□□□ 0.46
MMP9-201ENST00000372330 CSTF2P33240 577 aaKnown RBP eCLIP17.89■□□□□ 0.46
MMP9-201ENST00000372330 LILRA4P59901 499 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 LCP2Q13094 533 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 ASAH1Q13510 395 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 TIMM50Q3ZCQ8 353 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 FAM219BQ5XKK7 198 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 PLEKHH3Q7Z736 793 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 GALNT5Q7Z7M9 940 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 TTC29Q8NA56 475 aaPredicted RBP17.89■□□□□ 0.46
MMP9-201ENST00000372330 OR4M1Q8NGD0 313 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 PROKR1Q8TCW9 393 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 DNAJA4Q8WW22 397 aaPredicted RBP17.89■□□□□ 0.46
MMP9-201ENST00000372330 NT5C3BQ969T7 300 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 FAM162AQ96A26 154 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 FAM83DQ9H4H8 585 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 PCDHB5Q9Y5E4 795 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 AUP1Q9Y679 476 aa17.89■□□□□ 0.46
MMP9-201ENST00000372330 A0A0U1RQS6 177 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 TLL1O43897 1013 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 CELF2O95319 508 aaKnown RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 WISP3O95389 354 aaPredicted RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 ATF4P18848 351 aaPredicted RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 PITX1P78337 314 aaPredicted RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 PPP1R8Q12972 351 aaKnown RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 IKZF1Q13422 519 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 PRAMEF19Q5SWL8 479 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 UBXN11Q5T124 520 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 OTUD1Q5VV17 481 aaPredicted RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 CPZQ66K79 652 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 KDM4DQ6B0I6 523 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 YIPF7Q8N8F6 280 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 GLB1L3Q8NCI6 653 aaPredicted RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 LILRB1Q8NHL6 650 aaPredicted RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 KCNA7Q96RP8 456 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 TM9SF2Q99805 663 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 PRDM8Q9NQV8 689 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 DCAF13Q9NV06 445 aaKnown RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 IL20Q9NYY1 176 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 AASSQ9UDR5 926 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 ATPIF1Q9UII2 106 aa17.89■□□□□ 0.45
MMP9-201ENST00000372330 PDCD11Q14690 1871 aaKnown RBP17.89■□□□□ 0.45
MMP9-201ENST00000372330 MUSKO15146 869 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 ANXA9O76027 345 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 RECQL5O94762 991 aaPredicted RBP17.88■□□□□ 0.45
MMP9-201ENST00000372330 PRLP01236 227 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 IFI30P13284 250 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 WARSP23381 471 aaKnown RBP17.88■□□□□ 0.45
MMP9-201ENST00000372330 AIF1P55008 147 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 PRSS36Q5K4E3 855 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 MLIPQ5VWP3 458 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 KIAA1614Q5VZ46 1190 aa17.88■□□□□ 0.45
MMP9-201ENST00000372330 SPRYD7Q5W111 196 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms