RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 TAS2R1Q9NYW7 299 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 PLAGL1Q9UM63 463 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 FANCMQ8IYD8 2048 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 CPSF6Q16630 551 aaKnown RBP eCLIP16.32■□□□□ 0.2
PHGDH-202ENST00000369409 KIAA0895LQ68EN5 471 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 DUS1LQ6P1R4 473 aaKnown RBP16.32■□□□□ 0.2
PHGDH-202ENST00000369409 ENPP7Q6UWV6 458 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 FRMD1Q8N878 549 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 LMNTD1Q8N9Z9 388 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 HMGCLL1Q8TB92 370 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 MAGEC3Q8TD91 643 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 RLN3Q8WXF3 142 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 OR1E3Q8WZA6 343 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 UTP4Q969X6 686 aaKnown RBP16.32■□□□□ 0.2
PHGDH-202ENST00000369409 WDR92Q96MX6 357 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 OR4K3Q96R72 315 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 CCT7Q99832 543 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 GPR174Q9BXC1 333 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 FARSBQ9NSD9 589 aaKnown RBP16.32■□□□□ 0.2
PHGDH-202ENST00000369409 ACSL5Q9ULC5 683 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 WDR37Q9Y2I8 494 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 COL6A3P12111 3177 aa16.32■□□□□ 0.2
PHGDH-202ENST00000369409 E7EQ34 232 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 PRAMEF4O60810 478 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 CD6P30203 668 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 HALP42357 657 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 STX1BP61266 288 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 CHIT1Q13231 466 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 TSTA3Q13630 321 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 FASTKQ14296 549 aaKnown RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 GGTA1PQ4G0N0 100 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 PRAMEF9Q5VWM5 478 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 GK5Q6ZS86 529 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 FAM160A2Q8N612 972 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 SCARF2Q96GP6 870 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 RAB3IPQ96QF0 476 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 OR2M4Q96R27 311 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 SLC40A1Q9NP59 571 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 WSB2Q9NYS7 404 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 TDRKHQ9Y2W6 561 aaKnown RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 PCM1Q15154 2024 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 KCNE1BA0A087WTH5 132 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 MANBAO00462 879 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 RPN2P04844 631 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 KELP23276 732 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 OXTRP30559 389 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 ATP4BP51164 291 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 CCR5P51681 352 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 THOP1P52888 689 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 PRKG2Q13237 762 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 CUL3Q13618 768 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 NR6A1Q15406 480 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 ATP6AP1LQ52LC2 224 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 SGO1Q5FBB7 561 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 OGFOD2Q6N063 350 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 Q6ZSR9 355 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 C10orf67Q8IYJ2 551 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 SFRP1Q8N474 314 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 L3MBTL4Q8NA19 623 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 TMEM145Q8NBT3 493 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 OR5K2Q8NHB8 316 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 RAD51AP1Q96B01 352 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 BIRC7Q96CA5 298 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 IL17FQ96PD4 163 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 NELL2Q99435 816 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 CADM1Q9BY67 442 aaKnown RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 MRGBPQ9NV56 204 aa16.31■□□□□ 0.2
PHGDH-202ENST00000369409 ZNF490Q9ULM2 529 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-202ENST00000369409 PRR19A6NJB7 356 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 PSMD12O00232 456 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-202ENST00000369409 STK25O00506 426 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 ULK1O75385 1050 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 KRT6AP02538 564 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 KRT6BP04259 564 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 THRAP10827 490 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 EZRP15311 586 aaKnown RBP16.3■□□□□ 0.2
PHGDH-202ENST00000369409 HTR1BP28222 390 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 KRT6CP48668 564 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 PXNP49023 591 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-202ENST00000369409 MNAT1P51948 309 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 PNLIPRP1P54315 467 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 IRF8Q02556 426 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 PTK2BQ14289 1009 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 HERC3Q15034 1050 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 TCEA2Q15560 299 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 CAPN13Q6MZZ7 669 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-202ENST00000369409 LONP2Q86WA8 852 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 OR9I1Q8NGQ6 314 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 SNX19Q92543 992 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 USP7Q93009 1102 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 C12orf66Q96MD2 445 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 C1orf50Q9BV19 199 aa16.3■□□□□ 0.2
PHGDH-202ENST00000369409 TRIT1Q9H3H1 467 aaKnown RBP16.3■□□□□ 0.2
PHGDH-202ENST00000369409 IGHV1OR15-9A0A0B4J2B8 117 aa16.29■□□□□ 0.2
PHGDH-202ENST00000369409 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
PHGDH-202ENST00000369409 PDZK1P1A8MUH7 402 aa16.29■□□□□ 0.2
PHGDH-202ENST00000369409 PRAMEF26H0Y7S4 382 aa16.29■□□□□ 0.2
PHGDH-202ENST00000369409 CLGNO14967 610 aa16.29■□□□□ 0.2
PHGDH-202ENST00000369409 ZNF217O75362 1048 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms