RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PNLIPRP1P54315 467 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 RASA2Q15283 850 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 FAM83EQ2M2I3 478 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 PHF19Q5T6S3 580 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 KLC3Q6P597 504 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 SUSD1Q6UWL2 747 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ZNF574Q6ZN55 896 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 CCDC91Q7Z6B0 441 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ADAMTSL2Q86TH1 951 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ISCA2Q86U28 154 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 GPSM1Q86YR5 675 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 FAM20CQ8IXL6 584 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 SYTL1Q8IYJ3 562 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ADGRF3Q8IZF5 1079 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 RIBC1Q8N443 379 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 LINC01555Q8NAE3 123 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 FBXO15Q8NCQ5 510 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 OR2L8Q8NGY9 312 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 DENND1AQ8TEH3 1009 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ANKRD7Q92527 254 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 PPM1MQ96MI6 270 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 EGFL8Q99944 293 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 TMEM109Q9BVC6 243 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ATG10Q9H0Y0 220 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 SPHK1Q9NYA1 384 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ACTR10Q9NZ32 417 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 RNF112Q9ULX5 631 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 ZNF292O60281 2723 aa13.46□□□□□ -0.26
TPM3-211ENST00000368531 FAM221BA6H8Z2 402 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 SUPT3HB4E1H0 165 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 KIF1CO43896 1103 aaKnown RBP13.45□□□□□ -0.26
TPM3-211ENST00000368531 CSO75390 466 aaKnown RBP13.45□□□□□ -0.26
TPM3-211ENST00000368531 SUPT3HO75486 399 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 RASSF9O75901 435 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 DKK1O94907 266 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 CDK4P11802 303 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 JUPP14923 745 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 SLC26A3P40879 764 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 KCNC1P48547 511 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 KPNA2P52292 529 aaKnown RBP13.45□□□□□ -0.26
TPM3-211ENST00000368531 FOXC1Q12948 553 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 ANKS6Q68DC2 871 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 TMEM71Q6P5X7 295 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 DGLUCYQ7Z3D6 616 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 B3GNT8Q7Z7M8 397 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 PLXDC1Q8IUK5 500 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 C4orf33Q8N1A6 199 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 RCBTB1Q8NDN9 531 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 WDR48Q8TAF3 677 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 STAG3L4Q8TBR4 150 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 ZNF480Q8WV37 535 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 ADAMTS14Q8WXS8 1223 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 KIAA1191Q96A73 305 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 MED8Q96G25 268 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 CCDC138Q96M89 665 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 RUFY1Q96T51 708 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 RAB11FIP5Q9BXF6 653 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 KLHL25Q9H0H3 589 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 OR6C2Q9NZP2 312 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 CD274Q9NZQ7 290 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 SPATA7Q9P0W8 599 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.45□□□□□ -0.26
TPM3-211ENST00000368531 STOX2Q9P2F5 926 aaPredicted RBP13.45□□□□□ -0.26
TPM3-211ENST00000368531 LGALS13Q9UHV8 139 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 NOVA2Q9UNW9 492 aaKnown RBP13.45□□□□□ -0.26
TPM3-211ENST00000368531 CLCA2Q9UQC9 943 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 OARD1Q9Y530 152 aa13.45□□□□□ -0.26
TPM3-211ENST00000368531 IGHV5-10-1A0A0J9YXX1 117 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 C2orf74A8MZ97 194 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 UBXN8O00124 270 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 RGS16O15492 202 aaPredicted RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 SNRNP200O75643 2136 aaKnown RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 S100BP04271 92 aaPredicted RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 ENO2P09104 434 aaPredicted RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 COL6A2P12110 1019 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 UGT2B7P16662 529 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 CDH3P22223 829 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 PSMB5P28074 263 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 IMPA1P29218 277 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 PRDX3P30048 256 aaKnown RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 PEBP1P30086 187 aaKnown RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 SEPHS1P49903 392 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 INHBCP55103 352 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 SQSTM1Q13501 440 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 NAE1Q13564 534 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 ACAP2Q15057 778 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 TGFBIQ15582 683 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 PPP1R3AQ16821 1122 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 C18orf21Q32NC0 220 aaPredicted RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 FBXO48Q5FWF7 155 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 THEMIS2Q5TEJ8 643 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 CACHD1Q5VU97 1274 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 CDCP2Q5VXM1 449 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
TPM3-211ENST00000368531 WDR74Q6RFH5 385 aaPredicted RBP13.44□□□□□ -0.26
TPM3-211ENST00000368531 AGTRAPQ6RW13 159 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms