RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CBSLP0DN79 551 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 CD9P21926 228 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 CBSP35520 551 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 GABRA4P48169 554 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 SNX1Q13596 522 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 ZIC1Q15915 447 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 FHL5Q5TD97 284 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 C1orf189Q5VU69 101 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 YOD1Q5VVQ6 348 aaPredicted RBP14.28□□□□□ -0.12
CTSD-202ENST00000367196 PTRHD1Q6GMV3 140 aaKnown RBP14.28□□□□□ -0.12
CTSD-202ENST00000367196 JMJD6Q6NYC1 403 aaPredicted RBP14.28□□□□□ -0.12
CTSD-202ENST00000367196 DRICH1Q6PGQ1 229 aaPredicted RBP14.28□□□□□ -0.12
CTSD-202ENST00000367196 MICALCLQ6ZW33 695 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 ZNF534Q76KX8 674 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 DNAJC22Q8N4W6 341 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 ZNF655Q8N720 491 aaPredicted RBP14.28□□□□□ -0.12
CTSD-202ENST00000367196 CFAP61Q8NHU2 1237 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 MAGEC3Q8TD91 643 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 TM9SF4Q92544 642 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 PTERQ96BW5 349 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 FOPNLQ96NB1 174 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 NUDT9Q9BW91 350 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 SPRTNQ9H040 489 aaPredicted RBP14.28□□□□□ -0.12
CTSD-202ENST00000367196 EURLQ9NYK6 297 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 BFARQ9NZS9 450 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 SLC39A10Q9ULF5 831 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 MAP4K5Q9Y4K4 846 aa14.28□□□□□ -0.12
CTSD-202ENST00000367196 A0A0U1RQJ8 604 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 A0A1B0GX78 115 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 RASGRF2O14827 1237 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 CD3EAPO15446 510 aaKnown RBP14.27□□□□□ -0.13
CTSD-202ENST00000367196 SLCO2B1O94956 709 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 AGFG2O95081 481 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 MAGP20916 626 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 AOAHP28039 575 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 CCNFP41002 786 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 GRIA1P42261 906 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 BASP1P80723 227 aaKnown RBP14.27□□□□□ -0.13
CTSD-202ENST00000367196 NAA25Q14CX7 972 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 CCNG2Q16589 344 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 CYP2A13Q16696 494 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 NKAIN1Q4KMZ8 207 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 TCTE1Q5JU00 501 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 FAM69BQ5VUD6 431 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 MRPL14Q6P1L8 145 aaKnown RBP14.27□□□□□ -0.13
CTSD-202ENST00000367196 GSTA5Q7RTV2 222 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 OTOAQ7RTW8 1153 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 OR2L8Q8NGY9 312 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 FKBP10Q96AY3 582 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 RAD51AP1Q96B01 352 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 VPS50Q96JG6 964 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 ZNF778Q96MU6 729 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 LRRC4CQ9HCJ2 640 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 CHRAC1Q9NRG0 131 aa14.27□□□□□ -0.13
CTSD-202ENST00000367196 DHCR7Q9UBM7 475 aaKnown RBP14.27□□□□□ -0.13
CTSD-202ENST00000367196 SPTAN1Q13813 2472 aaKnown RBP14.27□□□□□ -0.13
CTSD-202ENST00000367196 SPTBN1Q01082 2364 aaKnown RBP14.27□□□□□ -0.13
CTSD-202ENST00000367196 COL12A1Q99715 3063 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 USP9YO00507 2555 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 USP9XQ93008 2570 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 NDUFS3O75489 264 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 TPBGLP0DKB5 382 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 ALAS2P22557 587 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 RPS3P23396 243 aaKnown RBP eCLIP14.26□□□□□ -0.138e-23■■■■■ 27.3
CTSD-202ENST00000367196 PEBP1P30086 187 aaKnown RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 NPY2RP49146 381 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 SESN2P58004 480 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 CDK16Q00536 496 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 SEMA3AQ14563 771 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 GRM7Q14831 915 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 MYBPC3Q14896 1274 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 SF1Q15637 639 aaKnown RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 INPP5JQ15735 1006 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 DCAF10Q5QP82 559 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 RNF187Q5TA31 235 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 MEI1Q5TIA1 1274 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 ARMC3Q5W041 872 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 SLC6A19Q695T7 634 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 MRNIPQ6NTE8 343 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 SDCCAG8Q86SQ7 713 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 GALNT16Q8N428 558 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 OTUD6BQ8N6M0 293 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 TTC29Q8NA56 475 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 SKA2Q8WVK7 121 aaPredicted RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 ZUFSPQ96AP4 578 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 MRM3Q9HC36 420 aaKnown RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 HOMER3Q9NSC5 361 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 NXT1Q9UKK6 140 aaKnown RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 CDYLQ9Y232 598 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 DRG1Q9Y295 367 aaKnown RBP14.26□□□□□ -0.13
CTSD-202ENST00000367196 FAM169AQ9Y6X4 670 aa14.26□□□□□ -0.13
CTSD-202ENST00000367196 PCM1Q15154 2024 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 NUP210LQ5VU65 1888 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 IQCF5A8MTL0 148 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 TARM1B6A8C7 271 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 H3BMM5 538 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 ALBP02768 609 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 ETS1P14921 441 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 ITGAXP20702 1163 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 GNLYP22749 145 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms