RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 COLEC12Q5KU26 742 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 SRFBP1Q8NEF9 429 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 PPP1R14AQ96A00 147 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TEPSINQ96N21 525 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 GFM1Q96RP9 751 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 SYT11Q9BT88 431 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TTLL2Q9BWV7 592 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 DERL2Q9GZP9 239 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TBC1D17Q9HA65 648 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 SMURF2Q9HAU4 748 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 A0A1W2PRB8 838 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 FAM92AA1XBS5 289 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 ARHGEF33A8MVX0 844 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 CLDN7O95471 211 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TGFB1P01137 390 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 DNAJA1P31689 397 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 TUBA4AP68366 448 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TARDBPQ13148 414 aaKnown RBP eCLIP13.43□□□□□ -0.26
VCP-201ENST00000358901 SERINC3Q13530 473 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TLR1Q15399 786 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TYSND1Q2T9J0 566 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 CRTC2Q53ET0 693 aaPredicted RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 LGI4Q8N135 537 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 NPLOC4Q8TAT6 608 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 DCSTAMPQ9H295 470 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 SUV39H2Q9H5I1 410 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 PTBP2Q9UKA9 531 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 FBXW2Q9UKT8 454 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 PI15O43692 258 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 HCN1O60741 890 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 SCN2BO60939 215 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 KHDRBS3O75525 346 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 T-ENOLP0DO92 83 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 CD247P20963 164 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 IDSP22304 550 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 S100A1P23297 94 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 ALDH3A2P51648 485 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 DNAJB13P59910 316 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 ABATP80404 500 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 RAPSNQ13702 412 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 DEFB115Q30KQ5 88 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 LIN54Q6MZP7 749 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 DNAJB7Q7Z6W7 309 aaPredicted RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 ADGRG6Q86SQ4 1221 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 ADGRG2Q8IZP9 1017 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 ZFAND2BQ8WV99 257 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 DNASE1L2Q92874 299 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 KCNC2Q96PR1 638 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 RPF2Q9H7B2 306 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 SP140LQ9H930 580 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 MARCH7Q9H992 704 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 LOC100130705A0A1B0GUX0 176 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 CREG1O75629 220 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 PTX3P26022 381 aaPredicted RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 BNC1Q01954 994 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 LARS2Q15031 903 aaKnown RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 C6orf136Q5SQH8 315 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
VCP-201ENST00000358901 GDF6Q6KF10 455 aaPredicted RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 RTL4Q6ZR62 310 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 GOLGA7Q7Z5G4 137 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 TMEM130Q8N3G9 435 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 C1orf52Q8N6N3 182 aaKnown RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 RASSF5Q8WWW0 418 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 KLHL31Q9H511 634 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 ZDHHC3Q9NYG2 299 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 FLRT1Q9NZU1 646 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 MALT1Q9UDY8 824 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 FZD4Q9ULV1 537 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 C10orf71Q711Q0 1435 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 PAPSS2O95340 614 aaPredicted RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 ZNF182P17025 639 aaPredicted RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 TIE1P35590 1138 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 DGKEP52429 567 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 RAB25P57735 213 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 SOX4Q06945 474 aaPredicted RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 PTCHD3Q3KNS1 767 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 C5orf22Q49AR2 442 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 IQCCQ4KMZ1 466 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 CYS1Q717R9 158 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 OTOP2Q7RTS6 562 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 CEP97Q8IW35 865 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 FBXO27Q8NI29 283 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 IPCEF1Q8WWN9 437 aaPredicted RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 TSGA13Q96PP4 275 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 ZNF347Q96SE7 839 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 ZCCHC3Q9NUD5 404 aaKnown RBP13.42□□□□□ -0.26
VCP-201ENST00000358901 SCML2Q9UQR0 700 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 SCAMP1O15126 338 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 CHST10O43529 356 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 OMPP47874 163 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 ACADVLP49748 655 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 ARSFP54793 590 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 PLEKHG6Q3KR16 790 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 TXNDC8Q6A555 127 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 NANOGP8Q6NSW7 305 aa13.42□□□□□ -0.26
VCP-201ENST00000358901 CES5AQ6NT32 575 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms