RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HTR7P34969 479 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 GRK3P35626 688 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 SOX6P35712 828 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 RPIAP49247 311 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 RAB15P59190 212 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 SPIBQ01892 262 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 GSTM4Q03013 218 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ACSM2AQ08AH3 577 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 IHHQ14623 411 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 NKG7Q16617 165 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 PHKG1Q16816 387 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 UAP1L1Q3KQV9 507 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ADPRMQ3LIE5 342 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 POM121L1PQ3SYA9 428 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 USP39Q53GS9 565 aaKnown RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ACSM2BQ68CK6 577 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 BHLHA9Q7RTU4 235 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TMEM179BQ7Z7N9 219 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CYP4Z1Q86W10 505 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CD200R1Q8TD46 325 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TANKQ92844 425 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 MYEOVQ96EZ4 313 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DUS3LQ96G46 650 aaKnown RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 EGLN2Q96KS0 407 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 OSBPL10Q9BXB5 764 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 PRRG3Q9BZD7 231 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ATP13A3Q9H7F0 1226 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 SIAEQ9HAT2 523 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CSNK1G1Q9HCP0 422 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CD84Q9UIB8 345 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CDH7Q9ULB5 785 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 SAMD4AQ9UPU9 718 aaKnown RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 BTBD3Q9Y2F9 522 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 LTBP4Q8N2S1 1624 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DYTNA2CJ06 578 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 MBLAC1A4D2B0 266 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 IQCA1LA6NCM1 817 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 LOC110117498-PIK3R3F6TDL0 507 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 AQP9O43315 295 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ESR1P03372 595 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 IL6P05231 212 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 BCKDHAP12694 445 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ENGP17813 658 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TYMPP19971 482 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 PTGER3P43115 390 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 OR1E2P47887 323 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 RUNX1T1Q06455 604 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 PLD1Q13393 1074 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 KCNJ8Q15842 424 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TIGD6Q17RP2 521 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DHRS4L2Q6PKH6 230 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 UBE2R2Q712K3 238 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 PHYKPLQ8IUZ5 450 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 STK40Q8N2I9 435 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TSPEARQ8WU66 669 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF641Q96N77 438 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ZFYVE1Q9HBF4 777 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF225Q9UK10 706 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DOCK1Q14185 1865 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CEP350Q5VT06 3117 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 EFCAB10A6NFE3 127 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 H3BN98 237 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CLIC1O00299 241 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 E2F3O00716 465 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ACSL4O60488 711 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CLDN9O95484 217 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 AKR1A1P14550 325 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CTSKP43235 329 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 GP2P55259 537 aaKnown RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CDH12P55289 794 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 BCL2L1Q07817 233 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ABRQ12979 859 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 COQ5Q5HYK3 327 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TPRG1LQ5T0D9 272 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 FAM171BQ6P995 826 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DLEU7Q6UYE1 221 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 PLEKHG7Q6ZR37 379 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ANKS3Q6ZW76 656 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 VPS37AQ8NEZ2 397 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 BPIFB1Q8TDL5 484 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 NELL1Q92832 810 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DEPDC7Q96QD5 511 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TSPAN18Q96SJ8 248 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 BARD1Q99728 777 aaKnown RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ADPRHL2Q9NX46 363 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 GPRC5BQ9NZH0 403 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 FLRT1Q9NZU1 646 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DNMT3LQ9UJW3 386 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 INTS6Q9UL03 887 aaKnown RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ABCG2Q9UNQ0 655 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 RGPD3A6NKT7 1758 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 RGPD4Q7Z3J3 1758 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 DNAH12Q6ZR08 3092 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 ANK1P16157 1881 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 A0A096LPI6 279 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 LOC285095A0A1B0GVY8 99 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 KPNA5O15131 536 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 SUV39H1O43463 412 aa6.41□□□□□ -1.38
CSDE1-203ENST00000358528 TSC22D2O75157 780 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms