RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 AMZ1Q400G9 498 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 ANKS6Q68DC2 871 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 EXOC3L1Q86VI1 746 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 OOSP2Q86WS3 158 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 SYTL1Q8IYJ3 562 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 BANPQ8N9N5 519 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 ATOH8Q96SQ7 321 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 NRTNQ99748 197 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 EPB41L1Q9H4G0 881 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 MKS1Q9NXB0 559 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 NUDT4Q9NZJ9 180 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 TMEM216Q9P0N5 145 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 CPSF2Q9P2I0 782 aaKnown RBP14.78□□□□□ -0.04
TPM1-206ENST00000358278 GRID1Q9ULK0 1009 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 ACTL7BQ9Y614 415 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 IGHV1OR21-1A0A087WYE8 117 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 OR6C74A6NCV1 312 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 UBXN8O00124 270 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 PROS1P07225 676 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 TPBGLP0DKB5 382 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 HSD17B2P37059 387 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 PNLIPRP1P54315 467 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 CDKL1Q00532 357 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 PRKAA1Q13131 559 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 TSTA3Q13630 321 aaPredicted RBP14.78□□□□□ -0.04
TPM1-206ENST00000358278 ARHGAP19Q14CB8 494 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 AGBL2Q5U5Z8 902 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 C16orf46Q6P387 395 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 CDHR3Q6ZTQ4 885 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 ALYREFQ86V81 257 aaKnown RBP14.78□□□□□ -0.04
TPM1-206ENST00000358278 TAX1BP1Q86VP1 789 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 CCDC63Q8NA47 563 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 DENND1AQ8TEH3 1009 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 ATL1Q8WXF7 558 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 RSC1A1Q92681 617 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 SH3GL2Q99962 352 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 MENTQ9BUN1 341 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 OR6C2Q9NZP2 312 aa14.78□□□□□ -0.04
TPM1-206ENST00000358278 STOX2Q9P2F5 926 aaPredicted RBP14.78□□□□□ -0.04
TPM1-206ENST00000358278 DCHS1Q96JQ0 3298 aa14.77□□□□□ -0.04
TPM1-206ENST00000358278 RFPL3O75679 317 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 RPLP0P05388 317 aaKnown RBP14.77□□□□□ -0.05
TPM1-206ENST00000358278 GFAPP14136 432 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 CREB1P16220 341 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 CSRP1P21291 193 aaKnown RBP14.77□□□□□ -0.05
TPM1-206ENST00000358278 IMPA1P29218 277 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 CAPZBP47756 277 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 KCNC1P48547 511 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 HNMTP50135 292 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 MAGOHP61326 146 aaKnown RBP14.77□□□□□ -0.05
TPM1-206ENST00000358278 CCDC153Q494R4 210 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 NKAIN2Q5VXU1 208 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 ARMC6Q6NXE6 501 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 C2orf73Q8N5S3 287 aaPredicted RBP14.77□□□□□ -0.05
TPM1-206ENST00000358278 OR2L8Q8NGY9 312 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 ZNF480Q8WV37 535 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 ARL8AQ96BM9 186 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 FBXL8Q96CD0 374 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 ABCG4Q9H172 646 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 HRASLS2Q9NWW9 162 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 WWOXQ9NZC7 414 aa14.77□□□□□ -0.05
TPM1-206ENST00000358278 MDC1Q14676 2089 aaKnown RBP14.76□□□□□ -0.05
TPM1-206ENST00000358278 GSAPA4D1B5 854 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 OR5K3A6NET4 321 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 B4GAT1O43505 415 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 SMIM24O75264 130 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 ERGP11308 486 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 POLR2CP19387 275 aaPredicted RBP14.76□□□□□ -0.05
TPM1-206ENST00000358278 SDHBP21912 280 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 ILKQ13418 452 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 CYP2A13Q16696 494 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 RSPO4Q2I0M5 234 aaPredicted RBP14.76□□□□□ -0.05
TPM1-206ENST00000358278 AGTRAPQ6RW13 159 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 GLRX5Q86SX6 157 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 TCAIMQ8N3R3 496 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 LMNTD1Q8N9Z9 388 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 LINC01555Q8NAE3 123 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 PDPRQ8NCN5 879 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 PPFIBP2Q8ND30 876 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 NCSTNQ92542 709 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 TLCD1Q96CP7 247 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 MED8Q96G25 268 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 ATP6V1G3Q96LB4 118 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 ATG10Q9H0Y0 220 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 LRRN3Q9H3W5 708 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 SSU72Q9NP77 194 aaKnown RBP14.76□□□□□ -0.05
TPM1-206ENST00000358278 KCNK9Q9NPC2 374 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 ABCF3Q9NUQ8 709 aa14.76□□□□□ -0.05
TPM1-206ENST00000358278 PIPSLA2A3N6 862 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 MATN2O00339 956 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 TM4SF5O14894 197 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 ATP8B1O43520 1251 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 CHRM5P08912 532 aaPredicted RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 TAC1P20366 129 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 NOVA1P51513 510 aaKnown RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 TBPL1P62380 186 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 CCL7P80098 99 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 FASTKQ14296 549 aaKnown RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 TTMPQ5BVD1 217 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 CDKL4Q5MAI5 379 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms