RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SLC1A7O00341 560 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 TBX1O43435 398 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 TULP3O75386 442 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 VPS26AO75436 327 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ANGPTL1O95841 491 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZFP36L2P47974 494 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 IL2P60568 153 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PCBP1Q15365 356 aaKnown RBP eCLIP8.07□□□□□ -1.124e-8■■■□□ 14.6
CDC42SE1-201ENST00000357235 TRIP4Q15650 581 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 UPP1Q16831 310 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 RBM48Q5RL73 367 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 CCBE1Q6UXH8 406 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 LRRC8DQ7L1W4 858 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PAGE2Q7Z2X7 111 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZFAND4Q86XD8 727 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 EID3Q8N140 333 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 FKBP10Q96AY3 582 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZBTB18Q99592 522 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 TRIM62Q9BVG3 475 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 ERVK-18Q9QC07 812 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 C3orf18Q9UK00 162 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 KCNH4Q9UQ05 1017 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PCDHGC4Q9Y5F7 938 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 A0A0G2JMZ2 1700 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 LRRC37A2A6NM11 1700 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 PLXNA1Q9UIW2 1896 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 MYLKQ15746 1914 aa8.07□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC12A8A0AV02 714 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 LCHNA4D1U4 455 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 MOXD2PA6NHM9 499 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 SAGE2PA6NJ88 616 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 IGLV3-25P01717 112 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 SPNP16150 400 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 EIF2DP41214 584 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 HK3P52790 923 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 EMX1Q04741 257 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 KRR1Q13601 381 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 RAPSNQ13702 412 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 COL19A1Q14993 1142 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ABRAXAS2Q15018 415 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 COQ5Q5HYK3 327 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 STEAP3Q658P3 488 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PSAPL1Q6NUJ1 521 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 DLEU7Q6UYE1 221 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC16A12Q6ZSM3 486 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 GALNT10Q86SR1 603 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 KLHDC8BQ8IXV7 354 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PIANPQ8IYJ0 282 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 KRTCAP2Q8N6L1 136 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PAPD5Q8NDF8 572 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ELMO1Q92556 727 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 HDAC2Q92769 488 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 RPL3LQ92901 407 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 TM9SF2Q99805 663 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 TTYH2Q9BSA4 534 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 DERL2Q9GZP9 239 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PAK1IP1Q9NWT1 392 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 IL37Q9NZH6 218 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 WBP11Q9Y2W2 641 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 NUP214P35658 2090 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 TRIP12Q14669 1992 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF99A8MXY4 864 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 AGRPO00253 132 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 SCAMP3O14828 347 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 BCKDKO14874 412 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 TLR5O60602 858 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 WISP3O95389 354 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 SERPINA1P01009 418 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 APOA1P02647 267 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 RPS17P08708 135 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 RHOQP17081 205 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PFKLP17858 780 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 AKT1P31749 480 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 HSPA7P48741 367 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATN1P54259 1190 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 GP2P55259 537 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 TARDBPQ13148 414 aaKnown RBP eCLIP8.06□□□□□ -1.128e-6■■■□□ 18.9
CDC42SE1-201ENST00000357235 CTF1Q16619 201 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 SMN1Q16637 294 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF181Q2M3W8 571 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 SPANXN4Q5MJ08 99 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ERAP2Q6P179 960 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 TMEM179BQ7Z7N9 219 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 HORMAD1Q86X24 394 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 LURAP1LQ8IV03 231 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PLD3Q8IV08 490 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 RIMKLAQ8IXN7 391 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF540Q8NDQ6 660 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 VPS37AQ8NEZ2 397 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR7D4Q8NG98 312 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR4F6Q8NGB9 312 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PROX1Q92786 737 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 BTN2A3PQ96KV6 586 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF583Q96ND8 569 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 MBOAT4Q96T53 435 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 RBM4BQ9BQ04 359 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 C17orf62Q9BQA9 187 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 RBM4Q9BWF3 364 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATP13A1Q9HD20 1204 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 ITM2CQ9NQX7 267 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms