RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TEX13DA0A0J9YY54 714 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 NOBOXO60393 691 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 LGR5O75473 907 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 FAM155BO75949 473 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 CNOT4O95628 575 aaKnown RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 OR10A6Q8NH74 314 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 MR1Q95460 341 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 BTN2A3PQ96KV6 586 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 R3HDM2Q9Y2K5 976 aaKnown RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 NOP16Q9Y3C1 178 aaKnown RBP16.94■□□□□ 0.3
COL27A1-201ENST00000356083 BACE2Q9Y5Z0 518 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 STK16O75716 305 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 GADD45GO95257 159 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 CHIT1Q13231 466 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 SNTA1Q13424 505 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 SLC2A7Q6PXP3 512 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 STYXQ8WUJ0 223 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 CCNB1IP1Q9NPC3 277 aa16.94■□□□□ 0.3
COL27A1-201ENST00000356083 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ANGPTL1O95841 491 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 MPSTP25325 297 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 DCKP27707 260 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 PTDSS1P48651 473 aaKnown RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 CLCNKBP51801 687 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ADAM17P78536 824 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 UBE2UQ5VVX9 321 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 LPIN3Q9BQK8 851 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 DUSP16Q9BY84 665 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ATF6P18850 670 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 CA9Q16790 459 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 TMEM225Q6GV28 225 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 TWIST2Q8WVJ9 160 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 PWWP2AQ96N64 755 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 IPPKQ9H8X2 491 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 MKKSQ9NPJ1 570 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 PTPN2P17706 415 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 TTKP33981 857 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF41P51814 821 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 MRPS5P82675 430 aaKnown RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 TYSND1Q2T9J0 566 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 RAB12Q6IQ22 244 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 SPATA19Q7Z5L4 167 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 PCDHGC3Q9UN70 934 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 FABP12A6NFH5 140 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 HEXBP07686 556 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 CREG2Q8IUH2 290 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 IL1RAPQ9NPH3 570 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 HAO2Q9NYQ3 351 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 DISP1Q96F81 1524 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ANKRD34BA5PLL1 514 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 J3QLW9 94 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 TOR1BO14657 336 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 TACSTD2P09758 323 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ZNF19P17023 458 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 LAG3P18627 525 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 MATKP42679 507 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 PITPNAQ00169 270 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 LAPTM5Q13571 262 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ZBED6CLQ96FA7 236 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 FAM83DQ9H4H8 585 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 HHLA1C9JL84 531 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 SHOXO15266 292 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 TREHO43280 583 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 RPP40O75818 363 aaKnown RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ATP6V0D1P61421 351 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 KLF1Q13351 362 aaPredicted RBP16.93■□□□□ 0.3
COL27A1-201ENST00000356083 MLC1Q15049 377 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 POGLUT1Q8NBL1 392 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ADAM18Q9Y3Q7 739 aa16.93■□□□□ 0.3
COL27A1-201ENST00000356083 ATXN7L1Q9ULK2 861 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 MPP1Q00013 466 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 PDPRQ8NCN5 879 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 NXNL1Q96CM4 212 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 PCYOX1Q9UHG3 505 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 PCDHB1Q9Y5F3 818 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 A0A1B0GV50 99 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 BRMS1LQ5PSV4 323 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 FRMD7Q6ZUT3 714 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 PIWIL4Q7Z3Z4 852 aaKnown RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 CUZD1Q86UP6 607 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 GNG8Q9UK08 70 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 NEMP2A6NFY4 417 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 DCAKDQ8WVC6 231 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 FAM84AQ96KN4 292 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 NECAB3Q96P71 396 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 FAM234BA2RU67 622 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 CCR8P51685 355 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 SERPINA9Q86WD7 417 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 WDR55Q9H6Y2 383 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 FBXL12Q9NXK8 326 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 IFT80Q9P2H3 777 aaPredicted RBP16.92■□□□□ 0.3
COL27A1-201ENST00000356083 A0A1W2PRU2 124 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 B4GALT5O43286 388 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 CLDN11O75508 207 aa16.92■□□□□ 0.3
COL27A1-201ENST00000356083 ALADP13716 330 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms