RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 LOC730098B7Z3J9 87 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 ALPIP09923 528 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 DNAJB1P25685 340 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 CDKN2CP42773 168 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 CLK3P49761 638 aaKnown RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 RPP38P78345 283 aaKnown RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 CD83Q01151 205 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 BRMS1LQ5PSV4 323 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 GTF2H4Q92759 462 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 MAL2Q969L2 176 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 ZNF641Q96N77 438 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 CDK5RAP1Q96SZ6 601 aaKnown RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 MRM3Q9HC36 420 aaKnown RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 ACOT13Q9NPJ3 140 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 PAQR5Q9NXK6 330 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 GPRC5BQ9NZH0 403 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 RNF6Q9Y252 685 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 ANKRD34BA5PLL1 514 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 UPK1BO75841 260 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 FGF1P05230 155 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 CYP2C18P33260 490 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 ZFP36L2P47974 494 aaKnown RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 DAPP51397 102 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 CRISP3P54108 245 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 VARS2Q5ST30 1063 aaKnown RBP13.3□□□□□ -0.28
TRIM4-203ENST00000355947 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 NLGN4XQ8N0W4 816 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 METTL4Q8N3J2 472 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 TMEM246Q9BRR3 403 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 BOCQ9BWV1 1114 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 DERL2Q9GZP9 239 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 ABCB9Q9NP78 766 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 SLC52A3Q9NQ40 469 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 RAD18Q9NS91 495 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 MALT1Q9UDY8 824 aa13.3□□□□□ -0.28
TRIM4-203ENST00000355947 E2F3O00716 465 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 RGS14O43566 566 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 TLL1O43897 1013 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 ITPKAP23677 461 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 TACR1P25103 407 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 GNPDA1P46926 289 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 LRRC74AQ0VAA2 488 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 DUSP28Q4G0W2 176 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 USP43Q70EL4 1123 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 DYNC2LI1Q8TCX1 351 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 GTPBP3Q969Y2 492 aaKnown RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 ELOVL6Q9H5J4 265 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 KLHL20Q9Y2M5 609 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CENPXA8MT69 81 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 FFAR2O15552 330 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 FHP07954 510 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 BMP1P13497 986 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 PCMT1P22061 227 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CD52P31358 61 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CASP3P42574 277 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 PSEN2P49810 448 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 FCGRTP55899 365 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 OR2T5Q6IEZ7 315 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 SUSD1Q6UWL2 747 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 SVOPLQ8N434 492 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 MDGA1Q8NFP4 955 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 OR2T29Q8NH02 315 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 DNASE1L2Q92874 299 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CENPOQ9BU64 300 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CLPBQ9H078 707 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 ATP13A1Q9HD20 1204 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 COQ3Q9NZJ6 369 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 A0A0G2JLL6 359 aaPredicted RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 C17orf102A2RUQ5 167 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 SH3BP5O60239 455 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 EIF2DP41214 584 aaKnown RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CTSKP43235 329 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 TGM4P49221 684 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 NKX3-2P78367 333 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CXCL17Q6UXB2 119 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 PRRT2Q7Z6L0 340 aaPredicted RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 TMEM132CQ8N3T6 1108 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 PARP16Q8N5Y8 322 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 VANGL1Q8TAA9 524 aaPredicted RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 RHEBL1Q8TAI7 183 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 PYURFQ96I23 114 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 NEDD4LQ96PU5 975 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 TINF2Q9BSI4 451 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 CNPPD1Q9BV87 410 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 AP5M1Q9H0R1 490 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 RAPGEFL1Q9UHV5 662 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 TMEFF2Q9UIK5 374 aaPredicted RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 DUSP12Q9UNI6 340 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 DLGAP4Q9Y2H0 992 aa13.29□□□□□ -0.28
TRIM4-203ENST00000355947 WBP11Q9Y2W2 641 aaKnown RBP13.29□□□□□ -0.28
TRIM4-203ENST00000355947 MROH6A6NGR9 719 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 PDHXO00330 501 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 WDR47O94967 919 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 NDST3O95803 873 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 HLA-DPA1P20036 260 aa13.28□□□□□ -0.28
TRIM4-203ENST00000355947 GKP32189 559 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms