RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 BCL7AQ4VC05 210 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 PYCR3Q53H96 274 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SOWAHCQ53LP3 525 aaPredicted RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 VARS2Q5ST30 1063 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 ARMC4Q5T2S8 1044 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 INTS11Q5TA45 600 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 CCDC117Q8IWD4 279 aaPredicted RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 FAM9CQ8IZT9 166 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 CDYL2Q8N8U2 506 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 CDKN2AIPNLQ96HQ2 116 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SLC30A3Q99726 388 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 DCSTAMPQ9H295 470 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ATP13A1Q9HD20 1204 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ZNF224Q9NZL3 707 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 GABRQQ9UN88 632 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 ECI2O75521 394 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 RPP40O75818 363 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 SERPINI2O75830 405 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 FTH1P02794 183 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 FDXRP22570 491 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 MGAT3Q09327 533 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SLAMF1Q13291 335 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SERINC3Q13530 473 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 DPY19L1Q2PZI1 675 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 DPY19L3Q6ZPD9 716 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 DCP1BQ8IZD4 617 aaKnown RBP9.18□□□□□ -0.94
SMG6-202ENST00000354901 LPCAT1Q8NF37 534 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 RHOXF1Q8NHV9 184 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 GRPEL2Q8TAA5 225 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 BTN2A3PQ96KV6 586 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 TRMOQ9BU70 441 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 NTN4Q9HB63 628 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 TAS2R9Q9NYW1 312 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 SCML2Q9UQR0 700 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 HCN4Q9Y3Q4 1203 aa9.18□□□□□ -0.94
SMG6-202ENST00000354901 EFCAB9A8MZ26 197 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 NDST3O95803 873 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CYBAP13498 195 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 SLC6A2P23975 617 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 GATMP50440 423 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 MAPK12P53778 367 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 UFM1P61960 85 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CD47Q08722 323 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TP53BP2Q13625 1128 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 SIM2Q14190 667 aaPredicted RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 SKIV2LQ15477 1246 aaKnown RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 TYSND1Q2T9J0 566 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ZRANB3Q5FWF4 1079 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TPRG1LQ5T0D9 272 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 GLT6D1Q7Z4J2 308 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 NRARPQ7Z6K4 114 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ADGRG5Q8IZF4 528 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 SIDT2Q8NBJ9 832 aaKnown RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 FBXO30Q8TB52 745 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 FKBP10Q96AY3 582 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 L3HYPDHQ96EM0 354 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 KCNS3Q9BQ31 491 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ROGDIQ9GZN7 287 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CRISPLD1Q9H336 500 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 FBXO44Q9H4M3 255 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ATP13A2Q9NQ11 1180 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ASB1Q9Y576 335 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 NUP214P35658 2090 aaPredicted RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 MYO16Q9Y6X6 1858 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CCDC154A6NI56 674 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 FXYD1O00168 92 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CBX4O00257 560 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ACOX3O15254 700 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 KATNA1O75449 491 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CLEC2LP0C7M8 214 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 IRF1P10914 325 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TCF3P15923 654 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 GSTM2P28161 218 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CYP4F2P78329 520 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CYP4F3Q08477 520 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 DUSP4Q13115 394 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 NOGQ13253 232 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PAGE3Q5JUK9 113 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 C6orf141Q5SZD1 244 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ANKS6Q68DC2 871 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 LINGO4Q6UY18 593 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ZNF517Q6ZMY9 492 aaPredicted RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 C16orf59Q7L2K0 433 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 SLC51BQ86UW2 128 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ZNF683Q8IZ20 524 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 OR10Q1Q8NGQ4 319 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 LRRC58Q96CX6 371 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 C1orf74Q96LT6 269 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ATOH8Q96SQ7 321 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 AARSD1Q9BTE6 412 aaKnown RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 RNF167Q9H6Y7 350 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TAS2R13Q9NYV9 303 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CD274Q9NZQ7 290 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PCDHB8Q9UN66 801 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PCDHGA10Q9Y5H3 936 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 LOC285095A0A1B0GVY8 99 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 HNRNPCL2B2RXH8 293 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms