RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ERVK-10P10266 1014 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 PCNAP12004 261 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 NME5P56597 212 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 TAF1AQ15573 450 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-203ENST00000354674 Q5BKY6 102 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 ARMC12Q5T9G4 340 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 IFNEQ86WN2 208 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 PIK3R3Q92569 461 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 LPGAT1Q92604 370 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 CDKL2Q92772 493 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 CNDP1Q96KN2 507 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 CDX2Q99626 313 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-203ENST00000354674 ACAT2Q9BWD1 397 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 TMEM245Q9H330 911 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 TMEM216Q9P0N5 145 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 PSME2Q9UL46 239 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 HCN2Q9UL51 889 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 PDZK1P1A8MUH7 402 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 C2CD4DB7Z1M9 353 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 M0R3G1 203 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 HAT1O14929 419 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 KRT37O76014 449 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 VAPBO95292 243 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 HSPA4LO95757 839 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 IL7RP16871 459 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF140P52738 457 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-203ENST00000354674 EPS8Q12929 822 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 TBCCQ15814 346 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 CDKN3Q16667 212 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 NHSL2Q5HYW2 709 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 COLEC12Q5KU26 742 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 Q6ZVU0 165 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 KCNMB4Q86W47 210 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 ZSWIM9Q86XI8 627 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 PAF1Q8N7H5 531 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 LPCAT1Q8NF37 534 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 OR6K2Q8NGY2 324 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 LILRB1Q8NHL6 650 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-203ENST00000354674 JPH3Q8WXH2 748 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-203ENST00000354674 LYSMD1Q96S90 227 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 PSD2Q9BQI7 771 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 MCCC2Q9HCC0 563 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 QPCTLQ9NXS2 382 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 IFT80Q9P2H3 777 aaPredicted RBP9.88□□□□□ -0.83
SYNE1-203ENST00000354674 SLC30A1Q9Y6M5 507 aa9.88□□□□□ -0.83
SYNE1-203ENST00000354674 TSPAN11A1L157 253 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 HMX2A2RU54 273 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 RFPL1O75677 317 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PRKCGP05129 697 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SNRPAP09012 282 aaKnown RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 MSL3P1P0C860 447 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ALOX12P18054 663 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SERPINA4P29622 427 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 GKP32189 559 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 NNMTP40261 264 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ARHGDIAP52565 204 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ENPP2Q13822 863 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PIGGQ5H8A4 983 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ATAD3CQ5T2N8 411 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 FAM91A1Q658Y4 838 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 TUBA3EQ6PEY2 450 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 GK5Q6ZS86 529 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 KIAA0408Q6ZU52 694 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SH2D5Q6ZV89 423 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SFTPA1Q8IWL2 248 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 TCAIMQ8N3R3 496 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 HM13Q8TCT9 377 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 STYXQ8WUJ0 223 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 GUCD1Q96NT3 240 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CPNE1Q99829 537 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CIPCQ9C0C6 399 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ING2Q9H160 280 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SUV39H2Q9H5I1 410 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SLC35C2Q9NQQ7 365 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 NLE1Q9NVX2 485 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SIRPGQ9P1W8 387 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 AASSQ9UDR5 926 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF221Q9UK13 617 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 MAN2B2Q9Y2E5 1009 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PCDHB9Q9Y5E1 797 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ARL5AQ9Y689 179 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 MAU2Q9Y6X3 613 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CENPXA8MT69 81 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CENPBD1B2RD01 187 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SLC7A4O43246 635 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 DYRK3O43781 588 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SNAP29O95721 258 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PAMP19021 973 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CNTFP26441 200 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 OR3A3P47888 321 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 SERPINB9P50453 376 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PLA2G16P53816 162 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ABCE1P61221 599 aaKnown RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 PPP1R8Q12972 351 aaKnown RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF267Q14586 743 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-203ENST00000354674 TIFABQ6ZNK6 161 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 UBE2J2Q8N2K1 259 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 CHST14Q8NCH0 376 aa9.87□□□□□ -0.83
SYNE1-203ENST00000354674 BLOC1S5Q8TDH9 187 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms