RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 HPS4Q9NQG7 708 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SEMA3GQ9NS98 782 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 EURLQ9NYK6 297 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 C14orf166Q9Y224 244 aaKnown RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 ZBTB1Q9Y2K1 713 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 PIK3C2AO00443 1686 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 UBE2QL1A1L167 161 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 FAM149AA5PLN7 773 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 USP17L23D6RBM5 183 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TMPRSS2O15393 492 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 AOAHP28039 575 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 MC4RP32245 332 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SERPINB10P48595 397 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 NR2C2P49116 596 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SLC11A2P49281 568 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 TUBP50607 506 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 C21orf59P57076 290 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CYP4F2P78329 520 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CD83Q01151 205 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SULT2A1Q06520 285 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 PNLIPRP3Q17RR3 467 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 SAMD5Q5TGI4 173 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 DNAJC24Q6P3W2 148 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 MAPKAPK5Q8IW41 473 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 XXYLT1Q8NBI6 393 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 MMABQ96EY8 250 aaPredicted RBP5.85□□□□□ -1.47
RFC1-201ENST00000349703 QRFPRQ96P65 431 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 REEP2Q9BRK0 252 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CHST11Q9NPF2 352 aa5.85□□□□□ -1.47
RFC1-201ENST00000349703 CYP27B1O15528 508 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 RNF13O43567 381 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ITGA10O75578 1167 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 TUSC2O75896 110 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 MLYCDO95822 493 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 C6P13671 934 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 TYRP14679 529 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 DDX6P26196 483 aaKnown RBP eCLIP5.84□□□□□ -1.47
RFC1-201ENST00000349703 ETV5P41161 510 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ALDH1A3P47895 512 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ELAVL1Q15717 326 aaKnown RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 C3orf62Q6ZUJ4 267 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 NCCRP1Q6ZVX7 275 aaPredicted RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 VTCN1Q7Z7D3 282 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 TTLL6Q8N841 843 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 C11orf65Q8NCR3 313 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 TCP10LQ8TDR4 215 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 DQX1Q8TE96 717 aaKnown RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 MTMR9Q96QG7 549 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 SF3B5Q9BWJ5 86 aaKnown RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 SLC6A17Q9H1V8 727 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 CD209Q9NNX6 404 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 UPB1Q9UBR1 384 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 MYRFQ9Y2G1 1151 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 PADI2Q9Y2J8 665 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 EMSYQ7Z589 1322 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 C10orf71Q711Q0 1435 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 CCDC195A0A1B0GUA6 201 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 TRABD2BA6NFA1 517 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 CYR61O00622 381 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 CTDSPLO15194 276 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 TBX10O75333 385 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 VCLP18206 1134 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 PVALBP20472 110 aaPredicted RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 TGM2P21980 687 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 FNTBP49356 437 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 EIF2B2P49770 351 aaKnown RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 HK3P52790 923 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 PRMT2P55345 433 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 VAMP2P63027 116 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 EPS8Q12929 822 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 C12orf60Q5U649 245 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ATG9BQ674R7 924 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 GJB7Q6PEY0 223 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 POTEGQ6S5H5 508 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 KYAT3Q6YP21 454 aaKnown RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 SLC44A3Q8N4M1 653 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ASB12Q8WXK4 309 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 GATA6Q92908 595 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 SLC35C1Q96A29 364 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 S100PBPQ96BU1 408 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ARHGEF26Q96DR7 871 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 KIRREL1Q96J84 757 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 SPATA13Q96N96 652 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 TEKT3Q9BXF9 490 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 FAM83DQ9H4H8 585 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ABCB10Q9NRK6 738 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 COMMD8Q9NX08 183 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 CMAHPQ9Y471 501 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ASB1Q9Y576 335 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 A0A1W2PQ45 241 aaPredicted RBP5.84□□□□□ -1.47
RFC1-201ENST00000349703 A0A1W2PQY0 241 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 MFN2O95140 757 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 PRSS2P07478 247 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 SERPINA6P08185 405 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ITGAMP11215 1152 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ELNP15502 786 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 F8A1P23610 371 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 HOXD10P28358 340 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 ACTR3P61158 418 aa5.84□□□□□ -1.47
RFC1-201ENST00000349703 MRPL49Q13405 166 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms