RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 TMPRSS11EQ9UL52 423 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 COMMD10Q9Y6G5 202 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 C5orf67F2Z3F1 127 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 SLC22A3O75751 556 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 SPIDRQ14159 915 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 RGS21Q2M5E4 152 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 HABP4Q5JVS0 413 aaKnown RBP20.81■□□□□ 0.92
PTPN18-202ENST00000347849 XAF1Q6GPH4 301 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 CLEC4FQ8N1N0 589 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 HGH1Q9BTY7 390 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 CPEB1Q9BZB8 566 aaKnown RBP20.81■□□□□ 0.92
PTPN18-202ENST00000347849 PSME2Q9UL46 239 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 ERVW-1Q9UQF0 538 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 PPIL1Q9Y3C6 166 aa20.81■□□□□ 0.92
PTPN18-202ENST00000347849 XYLBO75191 536 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 NR4A1P22736 598 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 RPS3P23396 243 aaKnown RBP eCLIP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 HOXA9P31269 272 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 POLR2JP52435 117 aaKnown RBP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 ARSFP54793 590 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 EEFSECP57772 596 aaKnown RBP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 LDLRAP1Q5SW96 308 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 C9orf50Q5SZB4 431 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 TMC5Q6UXY8 1006 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 USP45Q70EL2 814 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 FRS2Q8WU20 508 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 ERGIC3Q9Y282 383 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 MRPS23Q9Y3D9 190 aaKnown RBP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 STX16O14662 325 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 SNX2O60749 519 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 EEDO75530 441 aaKnown RBP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 FGF19O95750 216 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 GUCA1CO95843 209 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 TCF3P15923 654 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 CYP2A13Q16696 494 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 NCCRP1Q6ZVX7 275 aaPredicted RBP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 SPATA19Q7Z5L4 167 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 STK32CQ86UX6 486 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 CBARPQ8N350 705 aaPredicted RBP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 TSPEARQ8WU66 669 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 NRBF2Q96F24 287 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 ZFYVE19Q96K21 471 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 NSMCE2Q96MF7 247 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 C1QTNF3Q9BXJ4 246 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 RIC8BQ9NVN3 520 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 AIG1Q9NVV5 245 aa20.8■□□□□ 0.92
PTPN18-202ENST00000347849 LEF1Q9UJU2 399 aaPredicted RBP20.8■□□□□ 0.92
PTPN18-202ENST00000347849 AGAP14A8MT82 685 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 ADAM23O75077 832 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 VPS4BO75351 444 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 CLPXO76031 633 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 ESRRBO95718 433 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 CTSLP07711 333 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 JUNBP17275 347 aaPredicted RBP20.79■□□□□ 0.92
PTPN18-202ENST00000347849 CDH3P22223 829 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 RXRGP48443 463 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 UBE3AQ05086 875 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 PHKG1Q16816 387 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 GPRC6AQ5T6X5 926 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 GDPD4Q6W3E5 623 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 R3HCC1LQ7Z5L2 792 aaKnown RBP20.79■□□□□ 0.92
PTPN18-202ENST00000347849 PROSER1Q86XN7 944 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 LEMD2Q8NC56 503 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 PDPRQ8NCN5 879 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 BPIFB1Q8TDL5 484 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 RAB2BQ8WUD1 216 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 TMBIM1Q969X1 311 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 PDLIM5Q96HC4 596 aaKnown RBP20.79■□□□□ 0.92
PTPN18-202ENST00000347849 CEP44Q9C0F1 390 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 NSUN3Q9H649 340 aaKnown RBP20.79■□□□□ 0.92
PTPN18-202ENST00000347849 LTB4R2Q9NPC1 389 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 ELOVL2Q9NXB9 296 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 LEFTY1O75610 366 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 HNRNPA1P09651 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
PTPN18-202ENST00000347849 HTR1EP28566 365 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 DHCR24Q15392 516 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 SLC2A7Q6PXP3 512 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 KIAA0907Q7Z7F0 614 aaPredicted RBP20.79■□□□□ 0.92
PTPN18-202ENST00000347849 RIMKLAQ8IXN7 391 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 SCAMP4Q969E2 229 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 PALMDQ9NP74 551 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 TBC1D14Q9P2M4 693 aa20.79■□□□□ 0.92
PTPN18-202ENST00000347849 MTX2O75431 263 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 IL7RP16871 459 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 IL12AP29459 219 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 ALDH3A2P51648 485 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 RBBP7Q16576 425 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 ARSIQ5FYB1 569 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 NIPAL1Q6NVV3 410 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 WARS2Q9UGM6 360 aaKnown RBP20.78■□□□□ 0.92
PTPN18-202ENST00000347849 UPK1AO00322 258 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 ABCB7O75027 752 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 OR4F21O95013 312 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 POLR2EP19388 210 aaKnown RBP20.78■□□□□ 0.92
PTPN18-202ENST00000347849 PLA2G16P53816 162 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 ERVPABLB-1P60509 514 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 EMX2Q04743 252 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 PIGFQ07326 219 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 DET1Q7L5Y6 550 aa20.78■□□□□ 0.92
PTPN18-202ENST00000347849 IGFN1Q86VF2 1251 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms