RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 BACE2Q9Y5Z0 518 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 ADAMTS7Q9UKP4 1686 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 TRIM25Q14258 630 aaKnown RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 GPR180Q86V85 440 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 C12orf40Q86WS4 652 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 AADATQ8N5Z0 425 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 SLC43A3Q8NBI5 491 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 OR2T34Q8NGX1 318 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 OR2T3Q8NH03 318 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 FAM81AQ8TBF8 368 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 DNASE1L2Q92874 299 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 EPS8L2Q9H6S3 715 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 LEF1Q9UJU2 399 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 SNX7Q9UNH6 387 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 ARL5AQ9Y689 179 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 TBX18O95935 607 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 NTRK1P04629 796 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 KCNE1P15382 129 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 USP46P62068 366 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 CAMK1Q14012 370 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 NADK2Q4G0N4 442 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 CCDC103Q8IW40 242 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 C8orf59Q8N0T1 100 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 GJD3Q8N144 294 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 C12orf76Q8N812 135 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 NRG4Q8WWG1 115 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PMEPA1Q969W9 287 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 GFM1Q96RP9 751 aaKnown RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 C6orf62Q9GZU0 229 aaPredicted RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PTGES2Q9H7Z7 377 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 LIN28AQ9H9Z2 209 aaKnown RBP10.67□□□□□ -0.7
CLCN6-202ENST00000346436 PRKAB1Q9Y478 270 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 FADS3Q9Y5Q0 445 aa10.67□□□□□ -0.7
CLCN6-202ENST00000346436 TAF4O00268 1085 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 HLA-DQB2P05538 268 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 LAMP2P13473 410 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 MYBPC1Q00872 1141 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 LMAN2Q12907 356 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 NAE1Q13564 534 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 LPAL2Q16609 132 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CPSF6Q16630 551 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 SMU1Q2TAY7 513 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 EPGNQ6UW88 154 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ATCAYQ86WG3 371 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 PDSS2Q86YH6 399 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 DGAT2Q96PD7 388 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 GPR21Q99679 349 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 TBL1XR1Q9BZK7 514 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 TRIM8Q9BZR9 551 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ZNF304Q9HCX3 659 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 SLC28A2O43868 658 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 TRMUO75648 421 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 SLC22A3O75751 556 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 GOT2P00505 430 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 TNFRSF4P43489 277 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 PRKG2Q13237 762 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 TLDC1Q6P9B6 456 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 HEATR4Q86WZ0 1026 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CNTD1Q8N815 330 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ZNF527Q8NB42 609 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 DYTNA2CJ06 578 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 MTMR11A4FU01 709 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 E7ENX8 843 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 MATN3O15232 486 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 YKT6O15498 198 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CST1P01037 141 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CLDN10P78369 228 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 PLXDC1Q8IUK5 500 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ZC3H7AQ8IWR0 971 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ATP6V1C2Q8NEY4 427 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 DUSP23Q9BVJ7 150 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 RNF121Q9H920 327 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CNTN6Q9UQ52 1028 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 RUVBL1Q9Y265 456 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 TRAPPC6AO75865 159 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 PRDX6P30041 224 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CLCN7P51798 805 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 INCA1Q0VD86 236 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 MAPKAPK3Q16644 382 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ZC3HC1Q86WB0 502 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 CYB5D2Q8WUJ1 264 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ZNF778Q96MU6 729 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 SLC29A3Q9BZD2 475 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 PNO1Q9NRX1 252 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 ATXN10Q9UBB4 475 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 SCML2Q9UQR0 700 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 DGKBQ9Y6T7 804 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 KLHL33A6NCF5 533 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 COL6A2P12110 1019 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 YAP1P46937 504 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 EIF2B2P49770 351 aaKnown RBP10.66□□□□□ -0.7
CLCN6-202ENST00000346436 HK2P52789 917 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 DEFA1P59665 94 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 DEFA3P59666 94 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 PTPRCAPQ14761 206 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 NSMCE3Q96MG7 304 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 FNDC11Q9BVV2 318 aa10.66□□□□□ -0.7
CLCN6-202ENST00000346436 SPHK2Q9NRA0 654 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms