RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PDPK1O15530 556 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 UBTFL6P0CB48 400 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 C6P13671 934 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 SOX6P35712 828 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 CACNA2D1P54289 1103 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC7A9P82251 487 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 NET1Q7Z628 596 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 LIX1Q8N485 282 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 DHRSXQ8N5I4 330 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 JPH3Q8WXH2 748 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 WFS1O76024 890 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 HNRNPA2B1P22626 353 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 PTPRCAPQ14761 206 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 NEK5Q6P3R8 708 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 DEF8Q6ZN54 512 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 CILP2Q8IUL8 1156 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 UBR7Q8N806 425 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 OR9A1PQ8NGU1 263 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 CASP8AP2Q9UKL3 1982 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 MYH8P13535 1937 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 MAFKO60675 156 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 MACC1Q6ZN28 852 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 OFCC1Q8IZS5 231 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 PEX1O43933 1283 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 STATHP02808 62 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 IL6P05231 212 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 ATP5A1P25705 553 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 PTX3P26022 381 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 MPIP34949 423 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 RANBP1P43487 201 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 MRPS35P82673 323 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 MPP7Q5T2T1 576 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 EGFLAMQ63HQ2 1017 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 KCNJ9Q92806 393 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 KLF16Q9BXK1 252 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 DERL2Q9GZP9 239 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 POPDC3Q9HBV1 291 aa16.03■□□□□ 0.16
SMARCA4-201ENST00000344626 ECI2O75521 394 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ZMPSTE24O75844 475 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ADRB3P13945 408 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 NRG3P56975 720 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 MRPS15P82914 257 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 NFKB2Q00653 900 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 HNRNPA1L2Q32P51 320 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 POMZP3Q6PJE2 187 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ARMC8Q8IUR7 673 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 TRPV3Q8NET8 790 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 PCDHGA2Q9Y5H1 932 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 PRAMEF12O95522 483 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 TNFRSF4P43489 277 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 BDKRB1P46663 353 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 SPIBQ01892 262 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 HYAL2Q12891 473 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ALKAL1Q6UXT8 129 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ALYREFQ86V81 257 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 THOC6Q86W42 341 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ZC3HC1Q86WB0 502 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 KIAA2013Q8IYS2 634 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 DNAJB8Q8NHS0 232 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ART5Q96L15 291 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 Q96MT0 163 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 PRDM8Q9NQV8 689 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 ACSS2Q9NR19 701 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 CCL26Q9Y258 94 aa16.02■□□□□ 0.16
SMARCA4-201ENST00000344626 KCNJ13O60928 360 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 UNC5CO95185 931 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 SRCP12931 536 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 DRD4P21917 467 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 NUDT1P36639 197 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 IZUMO2Q6UXV1 221 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 GPR141Q7Z602 305 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 BANPQ8N9N5 519 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 TGM7Q96PF1 710 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC29A3Q9BZD2 475 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 SLITRK2Q9H156 845 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 CXCL16Q9H2A7 254 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 BATF3Q9NR55 127 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 OR10H3O60404 316 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 DNAJA2O60884 412 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 DPP6P42658 865 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 RPS14P62263 151 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 SPIN4Q56A73 249 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 CLCA3PQ9Y6N3 262 aa16.02■□□□□ 0.15
SMARCA4-201ENST00000344626 CAPN14A8MX76 684 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 C2orf74A8MZ97 194 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 DUX1O43812 170 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 TCEA3O75764 348 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 OLIG2Q13516 323 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 PEX5LQ8IYB4 626 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 EDAQ92838 391 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC22A12Q96S37 553 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 RANBP9Q96S59 729 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 CDX2Q99626 313 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 TDRD1Q9BXT4 1180 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 C19orf25Q9UFG5 118 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 MYL12BO14950 172 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms