RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SLC23A1Q9UHI7 598 aa18.11■□□□□ 0.49
SMPD1-201ENST00000342245 OR5K4A6NMS3 321 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 CLCA1A8K7I4 914 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 LACTBL1A8MY62 500 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 BTN3A3O00478 584 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 TSPAN4O14817 238 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 SLC7A4O43246 635 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 RFPL3O75679 317 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 ATF6P18850 670 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 FPR1P21462 350 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 PER3P56645 1201 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 PPP1R8Q12972 351 aaKnown RBP18.1■□□□□ 0.49
SMPD1-201ENST00000342245 KCNC3Q14003 757 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 BRAT1Q6PJG6 821 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 C19orf48Q6RUI8 117 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 PLET1Q6UQ28 207 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 TP53INP2Q8IXH6 220 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 DNASE1L2Q92874 299 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 TESCQ96BS2 214 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 TNIP3Q96KP6 325 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 IFT22Q9H7X7 185 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 KRT84Q9NSB2 600 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 UBP1Q9NZI7 540 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 SPASTQ9UBP0 616 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 RGS5O15539 181 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 CREG1O75629 220 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 WDR47O94967 919 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 CD1DP15813 335 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 OR8K5Q8NH50 307 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 CLEC4CQ8WTT0 213 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 APH1BQ8WW43 257 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 KIAA1143Q96AT1 154 aaPredicted RBP18.1■□□□□ 0.49
SMPD1-201ENST00000342245 MSANTD3Q96H12 275 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 ZC3HAV1LQ96H79 300 aaKnown RBP18.1■□□□□ 0.49
SMPD1-201ENST00000342245 GPR137Q96N19 417 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 FCRL5Q96RD9 977 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 THUMPD3Q9BV44 507 aaKnown RBP18.1■□□□□ 0.49
SMPD1-201ENST00000342245 PRRG3Q9BZD7 231 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 RASSF1Q9NS23 344 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 KIF17Q9P2E2 1029 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 UTS2RQ9UKP6 389 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 PARP14Q460N5 1801 aa18.1■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF646O15015 1829 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 E9PQ18 207 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ATG13O75143 517 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 TSPAN12O95859 305 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 FOSL1P15407 271 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 GEMP55040 296 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 TPI1P60174 286 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 SNRPD2P62316 118 aaKnown RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 YWHAHQ04917 246 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF79Q15937 498 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 GNASQ5JWF2 1037 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ANKS6Q68DC2 871 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 OR2T5Q6IEZ7 315 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 TYW3Q6IPR3 259 aaKnown RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 RASAL3Q86YV0 1011 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 TRIM48Q8IWZ4 208 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF557Q8N988 423 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 OR2T29Q8NH02 315 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 OR10A6Q8NH74 314 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 PTERQ96BW5 349 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 TFB2MQ9H5Q4 396 aaKnown RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 SLC2A6Q9UGQ3 507 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 DIMT1Q9UNQ2 313 aaKnown RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 SNX8Q9Y5X2 465 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 MGAMO43451 1857 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 A0A0B4J293 547 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 FAM220BPB1ANY3 271 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 PPP6CO00743 305 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 PI15O43692 258 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 PCDHGA12O60330 932 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 JCHAINP01591 159 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 HOXD4P09016 255 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 TGFB3P10600 412 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF37AP17032 561 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 WEE1P30291 646 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 HMGCLP35914 325 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 RORCP51449 518 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 RUNX1T1Q06455 604 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF267Q14586 743 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 PFKFB4Q16877 469 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 KLHL12Q53G59 568 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 LRRC66Q68CR7 880 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ZNF549Q6P9A3 640 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 TEX261Q6UWH6 196 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 GDPGP1Q6ZNW5 385 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 BNIPLQ7Z465 357 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ZDHHC21Q8IVQ6 265 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ENTHD1Q8IYW4 607 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 DEFB106AQ8N104 65 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 DNAJC22Q8N4W6 341 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 C18orf25Q96B23 403 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 RNF31Q96EP0 1072 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 C11orf54Q9H0W9 315 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-201ENST00000342245 RNF167Q9H6Y7 350 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 POPDC3Q9HBV1 291 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 ABCB8Q9NUT2 735 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 U3KQ87 197 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 A0A0G2JMZ2 1700 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms