RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.88□□□□□ -0.03
VAPA-201ENST00000340541 TEDDM1Q5T9Z0 273 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 SPESP1Q6UW49 350 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 TRIM73Q86UV7 250 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 ANKMY2Q8IV38 441 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 LMNTD1Q8N9Z9 388 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 BBOF1Q8ND07 529 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 RNF31Q96EP0 1072 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 CFAP36Q96G28 342 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 ELMO2Q96JJ3 720 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 IL17FQ96PD4 163 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 TRAPPC9Q96Q05 1148 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 AARSD1Q9BTE6 412 aaKnown RBP14.88□□□□□ -0.03
VAPA-201ENST00000340541 FGF21Q9NSA1 209 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 KLHL42Q9P2K6 505 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 COMMD10Q9Y6G5 202 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 SPTA1P02549 2419 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 ZNF891A8MT65 544 aaPredicted RBP14.87□□□□□ -0.03
VAPA-201ENST00000340541 E5RI56 91 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 AHSGP02765 367 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 RPN2P04844 631 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 CD9P21926 228 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 BDKRB1P46663 353 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 CARSP49589 748 aaKnown RBP14.87□□□□□ -0.03
VAPA-201ENST00000340541 CYP4F2P78329 520 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 ACY1Q03154 408 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 TRADDQ15628 312 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 GPR19Q15760 415 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 KIAA0408Q6ZU52 694 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 GALNT7Q86SF2 657 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 PPP1R3BQ86XI6 285 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 RASGRP3Q8IV61 690 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 FBXO36Q8NEA4 188 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 GSDMBQ8TAX9 411 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 CD200R1Q8TD46 325 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 DENND1AQ8TEH3 1009 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 ZNF501Q96CX3 271 aaPredicted RBP14.87□□□□□ -0.03
VAPA-201ENST00000340541 SLC45A3Q96JT2 553 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 NDNQ99608 321 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 GPR21Q99679 349 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 KLHL25Q9H0H3 589 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 TSR3Q9UJK0 312 aaKnown RBP14.87□□□□□ -0.03
VAPA-201ENST00000340541 DHRS7Q9Y394 339 aa14.87□□□□□ -0.03
VAPA-201ENST00000340541 NDC80O14777 642 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 RASGRF2O14827 1237 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 PRICKLE3O43900 615 aaPredicted RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 KDM1AO60341 852 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 SPAG6O75602 509 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 URI1O94763 535 aaPredicted RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 MSL3P1P0C860 447 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 LIFP15018 202 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 ARL4DP49703 201 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 TUBB4BP68371 445 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 CKAP4Q07065 602 aaKnown RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 CUL1Q13616 776 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 TUBB2AQ13885 445 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 MAP7Q14244 749 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 KIR2DS3Q14952 304 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 ZIC1Q15915 447 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 KLHL38Q2WGJ6 581 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 CRTC2Q53ET0 693 aaPredicted RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 RBM20Q5T481 1227 aaKnown RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 PWWP2BQ6NUJ5 590 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 ZDHHC24Q6UX98 284 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 CYHR1Q6ZMK1 362 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 BPHLQ86WA6 291 aaPredicted RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 NLGN4XQ8N0W4 816 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 NLGN4YQ8NFZ3 816 aaPredicted RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 OR2L8Q8NGY9 312 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 SKA2Q8WVK7 121 aaPredicted RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 KIAA1143Q96AT1 154 aaPredicted RBP14.86□□□□□ -0.03
VAPA-201ENST00000340541 RAD51AP1Q96B01 352 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 FCRL4Q96PJ5 515 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 TUBB2BQ9BVA1 445 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 ULBP3Q9BZM4 244 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 CCDC68Q9H2F9 335 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 PDE7BQ9NP56 450 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 SOHLH2Q9NX45 425 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 MOCS1Q9NZB8 636 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 RARRES3Q9UL19 164 aa14.86□□□□□ -0.03
VAPA-201ENST00000340541 ARHGEF33A8MVX0 844 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 PSIP1O75475 530 aaKnown RBP14.85□□□□□ -0.03
VAPA-201ENST00000340541 KIAA0754O94854 1291 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 CCNFP41002 786 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 CCR10P46092 362 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 GABRA4P48169 554 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 CDKN2DP55273 166 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 ABHD18Q0P651 414 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 CALCOCO2Q13137 446 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 WHAMMP3Q1A5X7 153 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 SLC5A12Q1EHB4 618 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 TMTC4Q5T4D3 741 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 CYB5D1Q6P9G0 228 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 CDHR3Q6ZTQ4 885 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 NEK10Q6ZWH5 1172 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 FAM20CQ8IXL6 584 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 ZBED8Q8IZ13 594 aa14.85□□□□□ -0.03
VAPA-201ENST00000340541 C2orf73Q8N5S3 287 aaPredicted RBP14.85□□□□□ -0.03
VAPA-201ENST00000340541 C19orf47Q8N9M1 422 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms