RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ESX1Q8N693 406 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 C2CD4AQ8NCU7 369 aaPredicted RBP14.74□□□□□ -0.05
PRKN-201ENST00000338468 CALML6Q8TD86 181 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 DENND1AQ8TEH3 1009 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 FCRL4Q96PJ5 515 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 FAM167BQ9BTA0 163 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 NAT9Q9BTE0 207 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 TRIM4Q9C037 500 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 AKIRIN1Q9H9L7 192 aaPredicted RBP14.74□□□□□ -0.05
PRKN-201ENST00000338468 FAM60AQ9NP50 221 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 SLC17A6Q9P2U8 582 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 LNPEPQ9UIQ6 1025 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 TSR3Q9UJK0 312 aaKnown RBP14.74□□□□□ -0.05
PRKN-201ENST00000338468 CHMP2BQ9UQN3 213 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 E7ESA3 106 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 SMAPO00193 183 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 RASGRF2O14827 1237 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 RAD51CO43502 376 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 PRICKLE3O43900 615 aaPredicted RBP14.73□□□□□ -0.05
PRKN-201ENST00000338468 NTRK1P04629 796 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 MSL3P1P0C860 447 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 CD9P21926 228 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 GABRA4P48169 554 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 CBLBQ13191 982 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 KIR2DS3Q14952 304 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 FASTKD3Q14CZ7 662 aaKnown RBP14.73□□□□□ -0.05
PRKN-201ENST00000338468 HIF1AQ16665 826 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 SLC5A12Q1EHB4 618 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.73□□□□□ -0.05
PRKN-201ENST00000338468 STEAP4Q687X5 459 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 CYB5D1Q6P9G0 228 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 TRMT10BQ6PF06 316 aaKnown RBP14.73□□□□□ -0.05
PRKN-201ENST00000338468 ZNF572Q7Z3I7 529 aaPredicted RBP14.73□□□□□ -0.05
PRKN-201ENST00000338468 SLC38A9Q8NBW4 561 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 OR2L8Q8NGY9 312 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 OR1L3Q8NH93 324 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 KCNJ9Q92806 393 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 CERS2Q96G23 380 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 AARSD1Q9BTE6 412 aaKnown RBP14.73□□□□□ -0.05
PRKN-201ENST00000338468 KLHL42Q9P2K6 505 aa14.73□□□□□ -0.05
PRKN-201ENST00000338468 SPTBP11277 2137 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 A0A0J9YY10 115 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 FAM187AA6NFU0 413 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 ARHGEF33A8MVX0 844 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 ISM1B1AKI9 464 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 E5RI56 91 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 H3BMH7 237 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 KDM1AO60341 852 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 PSIP1O75475 530 aaKnown RBP14.72□□□□□ -0.05
PRKN-201ENST00000338468 ARL4CP56559 192 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 CUL1Q13616 776 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 KLHL38Q2WGJ6 581 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 TMTC4Q5T4D3 741 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 TEDDM1Q5T9Z0 273 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 DUPD1Q68J44 220 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 CYHR1Q6ZMK1 362 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 TAX1BP1Q86VP1 789 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 C19orf47Q8N9M1 422 aaKnown RBP14.72□□□□□ -0.05
PRKN-201ENST00000338468 OR8K5Q8NH50 307 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 GSDMBQ8TAX9 411 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 CD200R1Q8TD46 325 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 SKA2Q8WVK7 121 aaPredicted RBP14.72□□□□□ -0.05
PRKN-201ENST00000338468 RAD51AP1Q96B01 352 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 LRRC39Q96DD0 335 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 CFAP36Q96G28 342 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 SLC45A3Q96JT2 553 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 GPR21Q99679 349 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 ERP44Q9BS26 406 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 CHRNA10Q9GZZ6 450 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 GPN2Q9H9Y4 310 aaPredicted RBP14.72□□□□□ -0.05
PRKN-201ENST00000338468 ZC3H7BQ9UGR2 993 aaKnown RBP14.72□□□□□ -0.05
PRKN-201ENST00000338468 DHRS7Q9Y394 339 aa14.72□□□□□ -0.05
PRKN-201ENST00000338468 COL12A1Q99715 3063 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 A0A1W2PPV9 198 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 TMEM150CB9EJG8 249 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 SCRG1O75711 98 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 AHSGP02765 367 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 CTSBP07858 339 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 CCNFP41002 786 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 CARSP49589 748 aaKnown RBP14.71□□□□□ -0.05
PRKN-201ENST00000338468 LINC00303Q3SY05 128 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 RBM20Q5T481 1227 aaKnown RBP14.71□□□□□ -0.05
PRKN-201ENST00000338468 NEK10Q6ZWH5 1172 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 ANKMY2Q8IV38 441 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 HMGCLL1Q8TB92 370 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 TCTN2Q96GX1 697 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 C16orf45Q96MC5 204 aaPredicted RBP14.71□□□□□ -0.05
PRKN-201ENST00000338468 NDNQ99608 321 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 ARHGAP9Q9BRR9 750 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 DPH5Q9H2P9 285 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 SYTL2Q9HCH5 934 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 LHX9Q9NQ69 397 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 GRHL1Q9NZI5 618 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 CROTQ9UKG9 612 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 KLHL20Q9Y2M5 609 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 MRPS18BQ9Y676 258 aaKnown RBP14.71□□□□□ -0.05
PRKN-201ENST00000338468 COMMD10Q9Y6G5 202 aa14.71□□□□□ -0.05
PRKN-201ENST00000338468 MYO1CO00159 1063 aa14.7□□□□□ -0.06
PRKN-201ENST00000338468 NKX2-8O15522 239 aa14.7□□□□□ -0.06
PRKN-201ENST00000338468 ITGB2P05107 769 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms