RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ARNT2Q9HBZ2 717 aa11.04□□□□□ -0.64
CSMD2-202ENST00000338325 ABHD10Q9NUJ1 306 aa11.04□□□□□ -0.64
CSMD2-202ENST00000338325 OLAHQ9NV23 265 aa11.04□□□□□ -0.64
CSMD2-202ENST00000338325 NLE1Q9NVX2 485 aaPredicted RBP11.04□□□□□ -0.64
CSMD2-202ENST00000338325 SMARCAL1Q9NZC9 954 aa11.04□□□□□ -0.64
CSMD2-202ENST00000338325 COPG2Q9UBF2 871 aa11.04□□□□□ -0.64
CSMD2-202ENST00000338325 ALG6Q9Y672 507 aa11.04□□□□□ -0.64
CSMD2-202ENST00000338325 PDZD2O15018 2839 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 CPAMD8Q8IZJ3 1885 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 CCDC78A2IDD5 438 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 DSCR3O14972 297 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 JRKO75564 520 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 STK10O94804 968 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 FTH1P02794 183 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 MAGP20916 626 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 GRNP28799 593 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 NSG1P42857 185 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 HADHBP55084 474 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 OTUD4Q01804 1114 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 CACNG1Q06432 222 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 MFAP5Q13361 173 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 SPARCL1Q14515 664 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 BRD3Q15059 726 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 RBBP7Q16576 425 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 SYTL3Q4VX76 610 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 CCDC181Q5TID7 509 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 RPUSD3Q6P087 351 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 ISLR2Q6UXK2 745 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 TMTC1Q8IUR5 882 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 MCATQ8IVS2 390 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 PIANPQ8IYJ0 282 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 BCORP1Q8N888 145 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 LRRC45Q96CN5 670 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 THOC3Q96J01 351 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 SOX17Q9H6I2 414 aaPredicted RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 SEMA3GQ9NS98 782 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 NXT1Q9UKK6 140 aaKnown RBP11.03□□□□□ -0.64
CSMD2-202ENST00000338325 PRSS21Q9Y6M0 314 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 CNTRLQ7Z7A1 2325 aa11.03□□□□□ -0.64
CSMD2-202ENST00000338325 SLC5A10A0PJK1 596 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 SYCE3A1L190 88 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 MACROD2A1Z1Q3 448 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-202ENST00000338325 KCNN4O15554 427 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 PKLRP30613 574 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 PLOD1Q02809 727 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-202ENST00000338325 ART3Q13508 389 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 ITIH4Q14624 930 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 YOD1Q5VVQ6 348 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-202ENST00000338325 PACS1Q6VY07 963 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 LINC00696Q6ZRV3 163 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 SHISA6Q6ZSJ9 500 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 FAM20CQ8IXL6 584 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 KLHDC8BQ8IXV7 354 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 OR11G2Q8NGC1 345 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.02□□□□□ -0.65
CSMD2-202ENST00000338325 RELTQ969Z4 430 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 SPATA13Q96N96 652 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 TRIM56Q9BRZ2 755 aaKnown RBP11.02□□□□□ -0.65
CSMD2-202ENST00000338325 CUTCQ9NTM9 273 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 CTSFQ9UBX1 484 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 KLHL20Q9Y2M5 609 aa11.02□□□□□ -0.65
CSMD2-202ENST00000338325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
CSMD2-202ENST00000338325 TPM1P09493 284 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 RBP3P10745 1247 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 RAB28P51157 221 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 TDGF1P3P51864 188 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 EIF3EP60228 445 aaKnown RBP11.01□□□□□ -0.65
CSMD2-202ENST00000338325 COPS2P61201 443 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 Q0VFX4 171 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 GRM7Q14831 915 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 TCTE1Q5JU00 501 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 ZNF324BQ6AW86 544 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-202ENST00000338325 MYO7BQ6PIF6 2116 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 NAPRTQ6XQN6 538 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 TTC29Q8NA56 475 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-202ENST00000338325 CATSPER1Q8NEC5 780 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 STYXQ8WUJ0 223 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 SLC22A18Q96BI1 424 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 CDKN2AIPNLQ96HQ2 116 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 LMF1Q96S06 567 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
CSMD2-202ENST00000338325 IGSF5Q9NSI5 407 aa11.01□□□□□ -0.65
CSMD2-202ENST00000338325 INTS7Q9NVH2 962 aaKnown RBP11.01□□□□□ -0.65
CSMD2-202ENST00000338325 KLF2Q9Y5W3 355 aaPredicted RBP11.01□□□□□ -0.65
CSMD2-202ENST00000338325 AKAP9Q99996 3911 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 VSTM2BA6NLU5 285 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 PCDH17O14917 1159 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 MFAP3LO75121 409 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 KLHL18O94889 574 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 HPP00738 406 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 OR56A5P0C7T3 313 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 MCM3P25205 808 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 MSNP26038 577 aaKnown RBP11□□□□□ -0.65
CSMD2-202ENST00000338325 CTNNA2P26232 953 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 PTGER4P35408 488 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 KCNK10P57789 538 aa11□□□□□ -0.65
CSMD2-202ENST00000338325 INAQ16352 499 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms