RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CXCR6O00574 342 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 ULK1O75385 1050 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 C7P10643 843 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 CDH1P12830 882 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 IFI30P13284 250 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 LPOP22079 712 aaPredicted RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 AZGP1P25311 298 aaKnown RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 LIMK1P53667 647 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 RAB15P59190 212 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 GTF2H2Q13888 395 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 SF3B4Q15427 424 aaKnown RBP eCLIP9.89□□□□□ -0.831e-6■■■■■ 55.4
HIF1A-202ENST00000337138 SPANXN2Q5MJ10 180 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 C6orf141Q5SZD1 244 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 ZCCHC8Q6NZY4 707 aaKnown RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 GTF2H2CQ6P1K8 395 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 DLEU7Q6UYE1 221 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 PRR23CQ6ZRP0 262 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 SPARTQ8N0X7 666 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 UBE2J2Q8N2K1 259 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 RNF175Q8N4F7 328 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 NDNFQ8TB73 568 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 ZFP90Q8TF47 636 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 SLC13A3Q8WWT9 602 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 S100ZQ8WXG8 99 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 RPL3LQ92901 407 aaKnown RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 TNKS2Q9H2K2 1166 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 POPDC3Q9HBV1 291 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 RPRD1BQ9NQG5 326 aaKnown RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 FAM118AQ9NWS6 357 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 TBC1D14Q9P2M4 693 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 TLR6Q9Y2C9 796 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 BTBD3Q9Y2F9 522 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 FCF1Q9Y324 198 aaKnown RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 PCDHB5Q9Y5E4 795 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 ELOVL7A1L3X0 281 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 SH3BP5O60239 455 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 GLUD1P00367 558 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 TACR2P21452 398 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 CD9P21926 228 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 HSPA14Q0VDF9 509 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 ZNF177Q13360 481 aaPredicted RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 SERINC3Q13530 473 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 RNF219Q5W0B1 726 aaPredicted RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 PROSER1Q86XN7 944 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 CRIPAKQ8N1N5 446 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 GTF3C2Q8WUA4 911 aaPredicted RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 SLC22A17Q8WUG5 538 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 PTBP2Q9UKA9 531 aaKnown RBP9.89□□□□□ -0.83
HIF1A-202ENST00000337138 RIMKLBQ9ULI2 386 aa9.89□□□□□ -0.83
HIF1A-202ENST00000337138 BCKDKO14874 412 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 NDUFS2O75306 463 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 VPS4BO75351 444 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 MED26O95402 600 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 RPS17P08708 135 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 COL6A1P12109 1028 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 PFKLP17858 780 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 HTR1BP28222 390 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 IDUAP35475 653 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 HPCAL1P37235 193 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 GZMMP51124 257 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 MAP2K5Q13163 448 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 SF1Q15637 639 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 DPY19L1Q2PZI1 675 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 CACHD1Q5VU97 1274 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 AFTPHQ6ULP2 937 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 NEK10Q6ZWH5 1172 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 GPR155Q7Z3F1 870 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 GOLGA7Q7Z5G4 137 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 HORMAD1Q86X24 394 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 OR52J3Q8NH60 311 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 ASB8Q9H765 288 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 TMEM248Q9NWD8 314 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 EHD3Q9NZN3 535 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 CRLS1Q9UJA2 301 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 PCDHGA3Q9Y5H0 932 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 PTPRSQ13332 1948 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 LOC100130705A0A1B0GUX0 176 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 LCHNA4D1U4 455 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 ABCB7O75027 752 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 SLC25A14O95258 325 aaPredicted RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 UGT2B4P06133 528 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 IDH2P48735 452 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 GATMP50440 423 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 EEFSECP57772 596 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 ZXDBP98169 803 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 NKG7Q16617 165 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 TRIM71Q2Q1W2 868 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 CTU2Q2VPK5 515 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 CCSAPQ6IQ19 270 aaPredicted RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 RBM23Q86U06 439 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 FLCNQ8NFG4 579 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 TRUB1Q8WWH5 349 aaKnown RBP9.88□□□□□ -0.83
HIF1A-202ENST00000337138 PEX13Q92968 403 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 TPK1Q9H3S4 243 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 FBXO44Q9H4M3 255 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 OPTCQ9UBM4 332 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 Q9Y3F1 56 aa9.88□□□□□ -0.83
HIF1A-202ENST00000337138 GMPPBQ9Y5P6 360 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms