RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ILDR1Q86SU0 546 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SPARTQ8N0X7 666 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UBE2J2Q8N2K1 259 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF781Q8N8C0 355 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CXorf40AQ8TE69 158 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PNPLA2Q96AD5 504 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 EPYCQ99645 322 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF436Q9C0F3 470 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PORCNQ9H237 461 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 XPNPEP1Q9NQW7 623 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 COL20A1Q9P218 1284 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HTR3EA5X5Y0 456 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 AGAP5A6NIR3 686 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF487B1APH4 448 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 H3BSA7 217 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HNRNPLP14866 589 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HOXC12P31275 282 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SCNN1GP51170 649 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TGFB2P61812 414 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 BLOC1S1P78537 153 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FAM183BPQ6ZVS7 135 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FBXO33Q7Z6M2 555 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RNF180Q86T96 592 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CARM1Q86X55 608 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CCDC71Q8IV32 467 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 YIPF4Q9BSR8 244 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CPVLQ9H3G5 476 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 NT5DC2Q9H857 520 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 MKKSQ9NPJ1 570 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TAS2R10Q9NYW0 307 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HCN2Q9UL51 889 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PIK3C2BO00750 1634 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 WASHC1A8K0Z3 465 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 WASH3PC4AMC7 463 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 THEGLP0DJG4 465 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PRPS1L1P21108 318 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GTF2A2P52657 109 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ACSBG2Q5FVE4 666 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FAM69AQ5T7M9 428 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OGFOD2Q6N063 350 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 WASH2PQ6VEQ5 465 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 AVL9Q8NBF6 648 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SLC45A3Q96JT2 553 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TMEM246Q9BRR3 403 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UCK2Q9BZX2 261 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SDCBP2Q9H190 292 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OSGEPL1Q9H4B0 414 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ENY2Q9NPA8 101 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PACSIN3Q9UKS6 424 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CBY1Q9Y3M2 126 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SALL3Q9BXA9 1300 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 F8VP50 259 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FFAR3O14843 346 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GPR42O15529 346 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ESR1P03372 595 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SLC35G4P0C7Q5 338 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UBBP0CG47 229 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UBCP0CG48 685 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TYRP14679 529 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PTGER3P43115 390 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RPS27AP62979 156 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UBA52P62987 128 aaKnown RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FMO1Q01740 532 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 RAB39AQ14964 217 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 UBXN11Q5T124 520 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 MIB1Q86YT6 1006 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 OR10H4Q8NGA5 316 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 CHPT1Q8WUD6 406 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 HSPBAP1Q96EW2 488 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 MTMR9Q96QG7 549 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GRXCR2A6NFK2 248 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF670-ZNF695F2Z2N8 137 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 TLX3O43711 291 aaPredicted RBP5.42□□□□□ -1.54
PTPRB-202ENST00000334414 ATP6AP2O75787 350 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 MT-CO2P00403 227 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 PGAM2P15259 253 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 SCUBE3Q8IX30 993 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 GPATCH2LQ9NWQ4 482 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 FBXO5Q9UKT4 447 aa5.42□□□□□ -1.54
PTPRB-202ENST00000334414 C12orf71A8MTZ7 269 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 C1QTNF3-AMACRE9PGA6 284 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ADAM10O14672 748 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 EI24O14681 340 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PMM2O15305 246 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TSPAN1O60635 241 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 IFNA5P01569 189 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ANXA4P09525 319 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CDH12P55289 794 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TAS2R50P59544 299 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TAF1AQ15573 450 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 KIAA0930Q6ICG6 404 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GPR65Q8IYL9 337 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TOP6BLQ8N6T0 577 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 STYXQ8WUJ0 223 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SNRNP25Q9BV90 132 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZDHHC4Q9NPG8 344 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 FLRT1Q9NZU1 646 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 IKZF2Q9UKS7 526 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 NUBP2Q9Y5Y2 271 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 A0A1W2PRQ8 180 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms