RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CTF1Q16619 201 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 SMN1Q16637 294 aaKnown RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CARD16Q5EG05 197 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 KIAA1841Q6NSI8 718 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CEP68Q76N32 757 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CYP4Z1Q86W10 505 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 MUL1Q969V5 352 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 NODALQ96S42 347 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 RBM4BQ9BQ04 359 aaKnown RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 RBM4Q9BWF3 364 aaKnown RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 FAM126AQ9BYI3 521 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CD244Q9BZW8 370 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CLMPQ9H6B4 373 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 PRDM8Q9NQV8 689 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 INIPQ9NRY2 104 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 DCAF13Q9NV06 445 aaKnown RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 GPRC5BQ9NZH0 403 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ERVK-18Q9QC07 812 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 MANBAO00462 879 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF682O95780 498 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 EFNA1P20827 205 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CD9P21926 228 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 HMGCLP35914 325 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 EMX1Q04741 257 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 GTF2H3Q13889 308 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 DGCR6Q14129 220 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ZXDCQ2QGD7 858 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 PGS1Q32NB8 556 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CCDC81Q6ZN84 652 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 EID3Q8N140 333 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 NDNFQ8TB73 568 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 TRUB1Q8WWH5 349 aaKnown RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 UBE2FQ969M7 185 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 PYCR2Q96C36 320 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ULK4Q96C45 1275 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 FAM120BQ96EK7 910 aaKnown RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CNDP2Q96KP4 475 aaKnown RBP12.03□□□□□ -0.48
VPS33B-201ENST00000333371 DEFB118Q96PH6 123 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ACPTQ9BZG2 426 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 RIBC2Q9H4K1 309 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 TMEM165Q9HC07 324 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 IL26Q9NPH9 171 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 SERHLQ9NQF3 203 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ABCG2Q9UNQ0 655 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ERGIC3Q9Y282 383 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 TBL1XO60907 577 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 ADAM23O75077 832 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 GLUD1P00367 558 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 PDYNP01213 254 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF12P17014 697 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 MAGEA10P43363 369 aaPredicted RBP12.02□□□□□ -0.48
VPS33B-201ENST00000333371 CDK5R2Q13319 367 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 TUBA3CQ13748 450 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 USP39Q53GS9 565 aaKnown RBP12.02□□□□□ -0.48
VPS33B-201ENST00000333371 HECTD3Q5T447 861 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 ARMC12Q5T9G4 340 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF691Q5VV52 312 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 PRR23BQ6ZRT6 265 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 ZFP90Q8TF47 636 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 CHPT1Q8WUD6 406 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 PDLIM5Q96HC4 596 aaKnown RBP12.02□□□□□ -0.48
VPS33B-201ENST00000333371 NEURL2Q9BR09 285 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 TNKS2Q9H2K2 1166 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 MBD1Q9UIS9 605 aaPredicted RBP12.02□□□□□ -0.48
VPS33B-201ENST00000333371 OARD1Q9Y530 152 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 SNX5Q9Y5X3 404 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 MICAL3Q7RTP6 2002 aa12.02□□□□□ -0.48
VPS33B-201ENST00000333371 CCDC88CQ9P219 2028 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 TRBV5-3A0A0A0MS03 114 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 C16orf96A6NNT2 1141 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 MYO1GB0I1T2 1018 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 hCG_2039718K7EN88 272 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 BCKDKO14874 412 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 FZD6O60353 706 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF7P17097 686 aaPredicted RBP12.02□□□□□ -0.49
VPS33B-201ENST00000333371 EPORP19235 508 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 OR1D2P34982 312 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 CHRNA6Q15825 494 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 RGS21Q2M5E4 152 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.49
VPS33B-201ENST00000333371 ADGRF1Q5T601 910 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 CACHD1Q5VU97 1274 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 GPR149Q86SP6 731 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 TSPAN33Q86UF1 283 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 STK40Q8N2I9 435 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 ARL10Q8N8L6 244 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 FAR1Q8WVX9 515 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 PIH1D2Q8WWB5 315 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 PPP1R14BQ96C90 147 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 SH3YL1Q96HL8 342 aaPredicted RBP12.02□□□□□ -0.49
VPS33B-201ENST00000333371 SLC22A12Q96S37 553 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 CDK5RAP1Q96SZ6 601 aaKnown RBP12.02□□□□□ -0.49
VPS33B-201ENST00000333371 VPS51Q9UID3 782 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 ENPP5Q9UJA9 477 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 PPT2Q9UMR5 302 aa12.02□□□□□ -0.49
VPS33B-201ENST00000333371 PER2O15055 1255 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 NDUFS2O75306 463 aa12.01□□□□□ -0.49
VPS33B-201ENST00000333371 PORP16435 677 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-201ENST00000333371 MSH3P20585 1137 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms