RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 IARS2Q9NSE4 1012 aaKnown RBP26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 MRPS18BQ9Y676 258 aaKnown RBP26.65■■□□□ 1.86
ATPAF1-201ENST00000329231 E7EQ34 232 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 BANF1O75531 89 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 F7P08709 466 aaPredicted RBP26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 ZIC1Q15915 447 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 ACSBG2Q5FVE4 666 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 HIBCHQ6NVY1 386 aaPredicted RBP26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 GPR135Q8IZ08 494 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 C2orf73Q8N5S3 287 aaPredicted RBP26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 TRIM44Q96DX7 344 aaPredicted RBP26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 SNF8Q96H20 258 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 C16orf45Q96MC5 204 aaPredicted RBP26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 KRT12Q99456 494 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 FAM60AQ9NP50 221 aa26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 TSR3Q9UJK0 312 aaKnown RBP26.64■■□□□ 1.86
ATPAF1-201ENST00000329231 ATMQ13315 3056 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 C1QL1O75973 258 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 MPP1Q00013 466 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 GPS2Q13227 327 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 KLHL38Q2WGJ6 581 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 PRAMEF17Q5VTA0 474 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 C16orf46Q6P387 395 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 ZNF549Q6P9A3 640 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 NEK10Q6ZWH5 1172 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 TAX1BP1Q86VP1 789 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 SLC38A9Q8NBW4 561 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 MR1Q95460 341 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 LRRC39Q96DD0 335 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 CLIP3Q96DZ5 547 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 GPR87Q9BY21 358 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 SEMA4CQ9C0C4 833 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 SLC7A5P2Q9GIP4 190 aa26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 ACTR5Q9H9F9 607 aaPredicted RBP26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 INTS7Q9NVH2 962 aaKnown RBP26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.63■■□□□ 1.85
ATPAF1-201ENST00000329231 HAUS5O94927 633 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 SEC31AO94979 1220 aaKnown RBP26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 FKBP9O95302 570 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 HBQ1P09105 142 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 ERVK-10P10266 1014 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 ITGA8P53708 1063 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 ARL4CP56559 192 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 SF1Q15637 639 aaKnown RBP26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 FAM199XQ6PEV8 388 aaPredicted RBP26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 EXD3Q8N9H8 876 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 C2CD4AQ8NCU7 369 aaPredicted RBP26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 HMGCLL1Q8TB92 370 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 TRIM31Q9BZY9 425 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 AKIRIN1Q9H9L7 192 aaPredicted RBP26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 FAM114A2Q9NRY5 505 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 SPATA7Q9P0W8 599 aa26.62■■□□□ 1.85
ATPAF1-201ENST00000329231 SMG1Q96Q15 3661 aaKnown RBP26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 EFCAB8A8MWE9 144 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 MEN1O00255 615 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 NDC80O14777 642 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 RECKO95980 971 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 SFTPCP11686 197 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 OAS2P29728 719 aaKnown RBP26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 CCR10P46092 362 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 RPS15P62841 145 aaKnown RBP26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 HIF1AQ16665 826 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 CCSMST1Q4G0I0 132 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 ZNF517Q6ZMY9 492 aaPredicted RBP26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 IGDCC3Q8IVU1 814 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 DSELQ8IZU8 1212 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 ZNF843Q8N446 348 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 LMNTD1Q8N9Z9 388 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 INPP5DQ92835 1189 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 SLC30A3Q99726 388 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 FAM117AQ9C073 453 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 ZC3H7BQ9UGR2 993 aaKnown RBP26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 MED16Q9Y2X0 877 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 DHRS7Q9Y394 339 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 AP1M2Q9Y6Q5 423 aa26.61■■□□□ 1.85
ATPAF1-201ENST00000329231 ZNF749O43361 778 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 VPS26AO75436 327 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 PSIP1O75475 530 aaKnown RBP26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 CREG1O75629 220 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 OR2B3O76000 313 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 CATP04040 527 aaKnown RBP26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 FAM87AP0C7U9 286 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 ENO3P13929 434 aaPredicted RBP26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 MAGP20916 626 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 RORAP35398 523 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 ELK3P41970 407 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 GABRA4P48169 554 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 DEFB110Q30KQ9 67 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 KIAA0408Q6ZU52 694 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 CNTN4Q8IWV2 1026 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 FAM20CQ8IXL6 584 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 DNAJC22Q8N4W6 341 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 SPATA4Q8NEY3 305 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 GIMAP7Q8NHV1 300 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 SEC14L1Q92503 715 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 CERS2Q96G23 380 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 GPR21Q99679 349 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 AARSD1Q9BTE6 412 aaKnown RBP26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 PLCL2Q9UPR0 1127 aa26.6■■□□□ 1.85
ATPAF1-201ENST00000329231 ARHGEF33A8MVX0 844 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms