RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ATG10Q9H0Y0 220 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC32A1Q9H598 525 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 CAPN10Q9HC96 672 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ZBTB26Q9HCK0 441 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 POT1Q9NUX5 634 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 DNAJC11Q9NVH1 559 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ANGPTL3Q9Y5C1 460 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 WDR47O94967 919 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 TGDSO95455 350 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 FAM107AO95990 144 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 XRCC1P18887 633 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 MPSTP25325 297 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC19A1P41440 591 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ARRB1P49407 418 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 TBPL1P62380 186 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 UBE2IP63279 158 aaKnown RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 GRIK2Q13002 908 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 NAE1Q13564 534 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 RBBP7Q16576 425 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ZC3H14Q6PJT7 736 aaKnown RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 CPLX4Q7Z7G2 160 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 TRIM48Q8IWZ4 208 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 LRRC56Q8IYG6 542 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 SYTL1Q8IYJ3 562 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 KIRREL3Q8IZU9 778 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 FAM46DQ8NEK8 389 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 OR52E1Q8NGJ3 308 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 AGAP11Q8TF27 550 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ZDHHC1Q8WTX9 485 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ZFPM2Q8WW38 1151 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 GRAMD1AQ96CP6 724 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 IL17FQ96PD4 163 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF382Q96SR6 550 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 SGPP1Q9BX95 441 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 FAM107BQ9H098 131 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 SEMA4BQ9NPR2 832 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 LNPEPQ9UIQ6 1025 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 DOLKQ9UPQ8 538 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 CSNK1G3Q9Y6M4 447 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 UBFD1O14562 309 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 CFIP05156 583 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 ANXA6P08133 673 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 EPB42P16452 691 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 TSPAN8P19075 237 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 CCND1P24385 295 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 RAB28P51157 221 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 HK2P52789 917 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PKNOX1P55347 436 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SHBQ15464 509 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PRAMEF14Q5SWL7 426 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 CAPN13Q6MZZ7 669 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 NAGSQ8N159 534 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF781Q8N8C0 355 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SNX31Q8N9S9 440 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 AVL9Q8NBF6 648 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 HMGCLL1Q8TB92 370 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC37A2Q8TED4 501 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 MED8Q96G25 268 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 CCT8L2Q96SF2 557 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 CCDC177Q9NQR7 707 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 ICKQ9UPZ9 632 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 R4GN57 208 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PRAMEF33A0A0G2JMD5 474 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 B4DGG1 531 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 E7ENX8 843 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 OR7A17O14581 309 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 YY2O15391 372 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 YKT6O15498 198 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SDC3O75056 442 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 KATNA1O75449 491 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 TROVE2P10155 538 aaKnown RBP eCLIP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 EPHA8P29322 1005 aaPredicted RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 TAP2Q03519 686 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 TRAF3Q13114 568 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC23A3Q6PIS1 610 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 GPRIN3Q6ZVF9 776 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC9B2Q86UD5 537 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 THOC6Q86W42 341 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 RBM12BQ8IXT5 1001 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PPFIBP2Q8ND30 876 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 OR2L8Q8NGY9 312 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PIWIL2Q8TC59 973 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PATE1Q8WXA2 126 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PYCR2Q96C36 320 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SHCBP1LQ9BZQ2 653 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 RABEP2Q9H5N1 569 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 NOL11Q9H8H0 719 aaKnown RBP9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 IPPKQ9H8X2 491 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 MID1IP1Q9NPA3 183 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 UCKL1Q9NWZ5 548 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 CPNE7Q9UBL6 633 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC22A14Q9Y267 594 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 PCDHGA5Q9Y5G8 931 aa9.93□□□□□ -0.82
VIPAS39-201ENST00000327028 A0A1B0GTQ1 180 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 PPP6CO00743 305 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 DFNA5O60443 496 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 OTCP00480 354 aa9.92□□□□□ -0.82
VIPAS39-201ENST00000327028 VIPP01282 170 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms