RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 HCRTR1O43613 425 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 SNRNP200O75643 2136 aaKnown RBP17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 ONECUT2O95948 504 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 PIM1P11309 404 aaPredicted RBP17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 AOAHP28039 575 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 FOLR3P41439 243 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 NPY2RP49146 381 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 ATP1A4Q13733 1029 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 TMED2Q15363 201 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 RPS6KA1Q15418 735 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 ZC3H12BQ5HYM0 836 aaKnown RBP17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 VWA5B1Q5TIE3 1220 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 MRPL14Q6P1L8 145 aaKnown RBP17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 NAPRTQ6XQN6 538 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 MRGPREQ86SM8 312 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 ZNF655Q8N720 491 aaPredicted RBP17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 OR2L8Q8NGY9 312 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 C1orf54Q8WWF1 131 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 PNPLA2Q96AD5 504 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 MENTQ9BUN1 341 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 RAB11FIP5Q9BXF6 653 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 IL22Q9GZX6 179 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 CATSPERZQ9NTU4 200 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 EURLQ9NYK6 297 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 NDOR1Q9UHB4 597 aa17.04■□□□□ 0.32
PTPMT1-201ENST00000326656 CCDC88CQ9P219 2028 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 TARM1B6A8C7 271 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 CD3EAPO15446 510 aaKnown RBP17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 IPO13O94829 963 aaKnown RBP17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 ALPPP05187 535 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 PEBP1P30086 187 aaKnown RBP17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 OTX2P32243 289 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 RPL22P35268 128 aaKnown RBP17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 CDK16Q00536 496 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 INPP5JQ15735 1006 aaPredicted RBP17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 DCAF10Q5QP82 559 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 MEI1Q5TIA1 1274 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 FAM69BQ5VUD6 431 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 IGFL3Q6UXB1 125 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 GAS2L3Q86XJ1 694 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 MCATQ8IVS2 390 aaKnown RBP17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 CLEC1AQ8NC01 280 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 GSDMBQ8TAX9 411 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 MAIP1Q8WWC4 291 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 ZUFSPQ96AP4 578 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 SLAMF7Q9NQ25 335 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 CHRAC1Q9NRG0 131 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 BFARQ9NZS9 450 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 GUCA1BQ9UMX6 200 aa17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 PTRH2Q9Y3E5 179 aaKnown RBP17.03■□□□□ 0.32
PTPMT1-201ENST00000326656 ESPL1Q14674 2120 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 A6NL46 340 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 ALBP02768 609 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 MAGP20916 626 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 RPS3P23396 243 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 GCGRP47871 477 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 SNX1Q13596 522 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 GRB7Q14451 532 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 SEMA3AQ14563 771 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 MYBPC3Q14896 1274 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 DEFB110Q30KQ9 67 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 TCTE1Q5JU00 501 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 FHL5Q5TD97 284 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 C1orf189Q5VU69 101 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 PTRHD1Q6GMV3 140 aaKnown RBP17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 VRK3Q8IV63 474 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 RAB42Q8N4Z0 105 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 RBMXL3Q8N7X1 1067 aaKnown RBP17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 LINC01555Q8NAE3 123 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 FKBP10Q96AY3 582 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 RAD51AP1Q96B01 352 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 P2RY12Q9H244 342 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 WDR54Q9H977 334 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 HOMER3Q9NSC5 361 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 TREX1Q9NSU2 369 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 IRAK4Q9NWZ3 460 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 IL1RAPL1Q9NZN1 696 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 DHCR7Q9UBM7 475 aaKnown RBP17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 GNPTGQ9UJJ9 305 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 SLC39A10Q9ULF5 831 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 PLAGL1Q9UM63 463 aa17.02■□□□□ 0.32
PTPMT1-201ENST00000326656 SHANK1Q9Y566 2161 aa17.02■□□□□ 0.31
PTPMT1-201ENST00000326656 RASGRF2O14827 1237 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 PFDN6O15212 129 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 SRPX2O60687 465 aaPredicted RBP17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 ETS1P14921 441 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 CCNFP41002 786 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 CSE1LP55060 971 aaKnown RBP17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 SLC6A19Q695T7 634 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 ZNF662Q6ZS27 426 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 Q8NA96 180 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 SPC24Q8NBT2 197 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 HMGCLL1Q8TB92 370 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 MAGEC3Q8TD91 643 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 TM9SF4Q92544 642 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 TCF12Q99081 682 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 SLC29A3Q9BZD2 475 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 LRRC4CQ9HCJ2 640 aa17.01■□□□□ 0.31
PTPMT1-201ENST00000326656 CUEDC1Q9NWM3 386 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms