RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 PSMB5P28074 263 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 SLC6A12P48065 614 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 TBPL1P62380 186 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 CDKL1Q00532 357 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 TAP2Q03519 686 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 PCBP2Q15366 365 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRPF3-201ENST00000324862 ELOCQ15369 112 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 ANKS6Q68DC2 871 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 WASH2PQ6VEQ5 465 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 SKA1Q96BD8 255 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 FBXL8Q96CD0 374 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 WASH6PQ9NQA3 447 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 THAP1Q9NVV9 213 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 SPASTQ9UBP0 616 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 SUSD2Q9UGT4 822 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 DOLKQ9UPQ8 538 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 TMEM131Q92545 1883 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 CASC3O15234 703 aaKnown RBP14.82□□□□□ -0.04
PRPF3-201ENST00000324862 PRAMEF4O60810 478 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 KATNA1O75449 491 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 DRD4P21917 467 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 GRK2P25098 689 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 GTF2H2Q13888 395 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 PRAMEF9Q5VWM5 478 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 CLEC6AQ6EIG7 209 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 GTF2H2CQ6P1K8 395 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 LRRC56Q8IYG6 542 aaPredicted RBP14.82□□□□□ -0.04
PRPF3-201ENST00000324862 FBXO15Q8NCQ5 510 aaPredicted RBP14.82□□□□□ -0.04
PRPF3-201ENST00000324862 ZNF483Q8TF39 744 aaPredicted RBP14.82□□□□□ -0.04
PRPF3-201ENST00000324862 CXorf40BQ96DE9 158 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 PPP1R36Q96LQ0 422 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 EPN3Q9H201 632 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 CAPN10Q9HC96 672 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 CPNE7Q9UBL6 633 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 ICKQ9UPZ9 632 aa14.82□□□□□ -0.04
PRPF3-201ENST00000324862 OR7A17O14581 309 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 JUNP05412 331 aaKnown RBP14.81□□□□□ -0.04
PRPF3-201ENST00000324862 GIMD1P0DJR0 217 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 SERPINB3P29508 390 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 ARL1P40616 181 aaPredicted RBP14.81□□□□□ -0.04
PRPF3-201ENST00000324862 PNLIPRP1P54315 467 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 TCF15Q12870 199 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 GPR18Q14330 331 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 CUZD1Q86UP6 607 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 SFRP1Q8N474 314 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 OR4E2Q8NGC2 313 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 SREK1Q8WXA9 508 aaKnown RBP14.81□□□□□ -0.04
PRPF3-201ENST00000324862 GAREM1Q9H706 876 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 IPPKQ9H8X2 491 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 SLC40A1Q9NP59 571 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 MID1IP1Q9NPA3 183 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 OPTCQ9UBM4 332 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 GMEB2Q9UKD1 530 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 ADAMTS9Q9P2N4 1935 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 GGT5P36269 586 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 MPLP40238 635 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 RBBP7Q16576 425 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 DUOXA1Q1HG43 343 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 SH2D4BQ5SQS7 431 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 TTC23LQ6PF05 361 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 SYVN1Q86TM6 617 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 TRIM42Q8IWZ5 723 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 PRSS33Q8NF86 280 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 RAB3IL1Q8TBN0 382 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 GTPBP2Q9BX10 602 aaKnown RBP14.81□□□□□ -0.04
PRPF3-201ENST00000324862 C1QTNF3Q9BXJ4 246 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 NPHS2Q9NP85 383 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 FAM86C1Q9NVL1 165 aa14.81□□□□□ -0.04
PRPF3-201ENST00000324862 WDFY3Q8IZQ1 3526 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 LMO7DNF2Z398 122 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 K7EPI3 171 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 NPHS1O60500 1241 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 PIK3CGP48736 1102 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 HNMTP50135 292 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 TCHHL1Q5QJ38 904 aaPredicted RBP14.8□□□□□ -0.04
PRPF3-201ENST00000324862 ZC3H14Q6PJT7 736 aaKnown RBP14.8□□□□□ -0.04
PRPF3-201ENST00000324862 THOC6Q86W42 341 aaKnown RBP14.8□□□□□ -0.04
PRPF3-201ENST00000324862 RFWD2Q8NHY2 731 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 CNDP1Q96KN2 507 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 CCT8L2Q96SF2 557 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 ELAC2Q9BQ52 826 aaKnown RBP14.8□□□□□ -0.04
PRPF3-201ENST00000324862 SPHK1Q9NYA1 384 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 DCTN4Q9UJW0 460 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 TIMM22Q9Y584 194 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 PTGDR2Q9Y5Y4 395 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 TP53BP1Q12888 1972 aaPredicted RBP14.8□□□□□ -0.04
PRPF3-201ENST00000324862 TMEM114B3SHH9 223 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 PPM1DO15297 605 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 NOBOXO60393 691 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 VIPP01282 170 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 MAPK9P45984 424 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 ERVPABLB-1P60509 514 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 UBE2IP63279 158 aaKnown RBP14.8□□□□□ -0.04
PRPF3-201ENST00000324862 VWA5B1Q5TIE3 1220 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 LETMD1Q6P1Q0 360 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 MAVSQ7Z434 540 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 CPLX4Q7Z7G2 160 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 GKN2Q86XP6 184 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 TRIM48Q8IWZ4 208 aa14.8□□□□□ -0.04
PRPF3-201ENST00000324862 SNX31Q8N9S9 440 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms