RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TRMOQ9BU70 441 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 OR52A5Q9H2C5 316 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 GSTO2Q9H4Y5 243 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 STN1Q9H668 368 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 ZNF696Q9H7X3 374 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PARVBQ9HBI1 364 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 CYP4F12Q9HCS2 524 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FGF22Q9HCT0 170 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 NPHS2Q9NP85 383 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PRMT8Q9NR22 394 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 TUBA8Q9NY65 449 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 CD274Q9NZQ7 290 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 SLC23A2Q9UGH3 650 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PTBP2Q9UKA9 531 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PDE10AQ9Y233 779 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 CA5BQ9Y2D0 317 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 EML5Q05BV3 1969 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PRSS38A1L453 326 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 E9PBE3 544 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 CCNT2O60583 730 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 SNX2O60749 519 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 NDUFS2O75306 463 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RPS17P08708 135 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 TDGF1P13385 188 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 HTR1BP28222 390 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 ACADLP28330 430 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PDHA2P29803 388 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RPIAP49247 311 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 AP1S2P56377 157 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PCBP2Q15366 365 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■■■ 27.4
DDX39A-202ENST00000324340 USP39Q53GS9 565 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 ARL13AQ5H913 290 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 TPRG1LQ5T0D9 272 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 SULT1C3Q6IMI6 304 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 UGT2A3Q6UWM9 527 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 SLC36A4Q6YBV0 504 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RIPOR1Q6ZS17 1223 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 CRLF3Q8IUI8 442 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 CCNYL1Q8N7R7 359 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PIWIL2Q8TC59 973 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 FNDC8Q8TC99 324 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PPP4R1Q8TF05 950 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 UBTD2Q8WUN7 234 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 GAB3Q8WWW8 586 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RHBDF1Q96CC6 855 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 MOCOSQ96EN8 888 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 VPS50Q96JG6 964 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 SPACA7Q96KW9 195 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RBM38Q9H0Z9 239 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 UTP6Q9NYH9 597 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
DDX39A-202ENST00000324340 RAB26Q9ULW5 256 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 PRKAB1Q9Y478 270 aa12.43□□□□□ -0.42
DDX39A-202ENST00000324340 LRP4O75096 1905 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 B2RBV5 119 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 E2F3O00716 465 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 FCHO1O14526 889 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 HGSO14964 777 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 VILLO15195 856 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 SIX3O95343 332 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 HSPA4LO95757 839 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 S100BP04271 92 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 CHRNGP07510 517 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 HNRNPCP07910 306 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 ANXA5P08758 320 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 CDK4P11802 303 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 PORP16435 677 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 CYP2A7P20853 494 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 CD27P26842 260 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 EEF1DP29692 281 aaKnown RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 GGT5P36269 586 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 CLCNKAP51800 687 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 PDK3Q15120 406 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 PLA2G4EQ3MJ16 856 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 TTC23LQ6PF05 361 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 UNC5DQ6UXZ4 953 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 Q6ZNX1 250 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 Q6ZSR6 202 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 NCCRP1Q6ZVX7 275 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 PDZD3Q86UT5 571 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 GALNT13Q8IUC8 556 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 ULK2Q8IYT8 1036 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 TCAIMQ8N3R3 496 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 MCOLN3Q8TDD5 553 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 SKA2Q8WVK7 121 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 OR1E3Q8WZA6 343 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 SLC35B4Q969S0 331 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 FOPNLQ96NB1 174 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 UHRF1Q96T88 793 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 TMEM120AQ9BXJ8 343 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 TRIM54Q9BYV2 358 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 WWP1Q9H0M0 922 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 KCNK13Q9HB14 408 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 MRPL40Q9NQ50 206 aaKnown RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 TM7SF3Q9NS93 570 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 FAM8A1Q9UBU6 413 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 ACSL5Q9ULC5 683 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 RAP2CQ9Y3L5 183 aa12.42□□□□□ -0.42
DDX39A-202ENST00000324340 TNPO3Q9Y5L0 923 aaKnown RBP12.42□□□□□ -0.42
DDX39A-202ENST00000324340 NCF1BA6NI72 391 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms