RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 GLT6D1Q7Z4J2 308 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 SNX20Q7Z614 316 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 GATAD2AQ86YP4 633 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 CD200R1Q8TD46 325 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 FATE1Q969F0 183 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 CDK5RAP1Q96SZ6 601 aaKnown RBP17.48■□□□□ 0.39
PRKCB-202ENST00000321728 COPS4Q9BT78 406 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 PRDM5Q9NQX1 630 aaPredicted RBP17.48■□□□□ 0.39
PRKCB-202ENST00000321728 TRMT13Q9NUP7 481 aaKnown RBP17.48■□□□□ 0.39
PRKCB-202ENST00000321728 LAMA3Q16787 3333 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 A0A096LPI6 279 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 SEC22BO75396 215 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 OTCP00480 354 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 C21orf33P30042 268 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 BRCC3P46736 316 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 IL10RBQ08334 325 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 TIGD6Q17RP2 521 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PSAPL1Q6NUJ1 521 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 ANKRD46Q86W74 232 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 HORMAD1Q86X24 394 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PIANPQ8IYJ0 282 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 IL17RDQ8NFM7 739 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 TP53INP1Q96A56 240 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 DHRS1Q96LJ7 313 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 SMIM14Q96QK8 99 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 GABARAPL1Q9H0R8 117 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 FARSBQ9NSD9 589 aaKnown RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 QPCTLQ9NXS2 382 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 KCNH4Q9UQ05 1017 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 IQCF5A8MTL0 148 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 NOTOA8MTQ0 251 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 HOXC11O43248 304 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PCDHGA12O60330 932 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 WBP4O75554 376 aaKnown RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 B3GAT3O94766 335 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 GUCA1CO95843 209 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 CXCR2P25025 360 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 ZNF140P52738 457 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PROX2Q3B8N5 592 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 SOWAHCQ53LP3 525 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 SDHAF4Q5VUM1 108 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 CCDC71Q8IV32 467 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 P3H2Q8IVL5 708 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 SCN4BQ8IWT1 228 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 NLGN4XQ8N0W4 816 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 GLB1L3Q8NCI6 653 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PSD4Q8NDX1 1056 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 OR10T2Q8NGX3 314 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 IGSF8Q969P0 613 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PDLIM5Q96HC4 596 aaKnown RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 CDADC1Q9BWV3 514 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 NUAK2Q9H093 628 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 RNF167Q9H6Y7 350 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 AMBNQ9NP70 447 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 NUDT4Q9NZJ9 180 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 RGS17Q9UGC6 210 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-202ENST00000321728 AP3M1Q9Y2T2 418 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PCDHGB6Q9Y5F9 930 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 GBF1Q92538 1859 aa17.47■□□□□ 0.39
PRKCB-202ENST00000321728 PDHXO00330 501 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 DSCR3O14972 297 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 GPR182O15218 404 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 SSX4O60224 188 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 MRPS14O60783 128 aaKnown RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 EPOP01588 193 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 DNTTP04053 509 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 HOXA9P31269 272 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 TBX4P57082 545 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 OR2B6P58173 313 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 PRKCDQ05655 676 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 DDR2Q16832 855 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 CTSL3PQ5NE16 218 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 MFSD4BQ5TF39 518 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 RAP1GAP2Q684P5 730 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 NPLOC4Q8TAT6 608 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 DNASE1L2Q92874 299 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 EHD3Q9NZN3 535 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 AGO1Q9UL18 857 aaKnown RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 SAMHD1Q9Y3Z3 626 aaKnown RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 M0R082 166 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 ZW10O43264 779 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 EFNA1P20827 205 aaPredicted RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 DNAJA1P31689 397 aaKnown RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 ARPC4P59998 168 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 RPP38P78345 283 aaKnown RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 MAD2L1Q13257 205 aaPredicted RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 ZRANB3Q5FWF4 1079 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 ATAD3CQ5T2N8 411 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 TM9SF3Q9HD45 589 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 SAMD4AQ9UPU9 718 aaKnown RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 TLR6Q9Y2C9 796 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 CCL27Q9Y4X3 112 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 ANGPTL3Q9Y5C1 460 aa17.46■□□□□ 0.39
PRKCB-202ENST00000321728 TNPO3Q9Y5L0 923 aaKnown RBP17.46■□□□□ 0.39
PRKCB-202ENST00000321728 KMOO15229 486 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 IL1RNP18510 177 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 OR1E1P30953 314 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 MAGEA2P43356 314 aa17.45■□□□□ 0.38
PRKCB-202ENST00000321728 HSPA7P48741 367 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms