RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MED8Q96G25 268 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 CNBD2Q96M20 576 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 VPS35Q96QK1 796 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 CGREF1Q99674 301 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 Q9H521 79 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 IGFLR1Q9H665 355 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 YY1AP1Q9H869 796 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 ARMC1Q9NVT9 282 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 TMEM265A0A087WTH1 108 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 C15orf38-AP3S2A0A0A6YYH1 394 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 ANKRD33BA6NCL7 494 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 SPINT1O43278 529 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 MMP20O60882 483 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 GSTM1P09488 218 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 LINGO3P0C6S8 592 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 PBX2P40425 430 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 PRLHRP49683 370 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 GSTM4Q03013 218 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 NAE1Q13564 534 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 SELPLGQ14242 412 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 ELAVL3Q14576 367 aaKnown RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 ZNF234Q14588 700 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 GAB4Q2WGN9 574 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 RNF220Q5VTB9 566 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 NEK10Q6ZWH5 1172 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 ARPINQ7Z6K5 226 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 MMAAQ8IVH4 418 aaKnown RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 SLC22A15Q8IZD6 547 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 RNF175Q8N4F7 328 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 ARRDC3Q96B67 414 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 TSSK3Q96PN8 268 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 SLC29A1Q99808 456 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 FAM83CQ9BQN1 747 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 CCM2Q9BSQ5 444 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 THUMPD3Q9BV44 507 aaKnown RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 PRM3Q9NNZ6 103 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 VAPAQ9P0L0 249 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 NFKBIL1Q9UBC1 381 aaPredicted RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 RAB26Q9ULW5 256 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 PCDHGB4Q9UN71 923 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 DLGAP4Q9Y2H0 992 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
IFT88-201ENST00000319980 PCDHGB5Q9Y5G0 923 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 V9GYQ6 96 aa7.37□□□□□ -1.23
IFT88-201ENST00000319980 REV3LO60673 3130 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 EDDM13A0A1B0GTR0 161 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 C7orf72A4D263 438 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 DENRO43583 198 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 LZTS3O60299 673 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 DFNA5O60443 496 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 KCNH1O95259 989 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 SLC16A8O95907 504 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 POU2F2P09086 479 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 ITGB7P26010 798 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 EEFSECP57772 596 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 OR4D2P58180 307 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 IRF8Q02556 426 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 PWP1Q13610 501 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GK3PQ14409 553 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 SPATS1Q496A3 300 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 USP39Q53GS9 565 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 FRG2Q64ET8 278 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 RAET1GQ6H3X3 334 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 TANGO2Q6ICL3 276 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 AGTRAPQ6RW13 159 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 ZBTB49Q6ZSB9 765 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 RNF165Q6ZSG1 346 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 ERMP1Q7Z2K6 904 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CACUL1Q86Y37 369 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 PTRH1Q86Y79 214 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 TRAPPC5Q8IUR0 188 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CFAP206Q8IYR0 622 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 L3MBTL4Q8NA19 623 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 PHC3Q8NDX5 983 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GTF2H4Q92759 462 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 COQ10AQ96MF6 247 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 FRG2BQ96QU4 278 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 OR52E6Q96RD3 313 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 UHRF1Q96T88 793 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 FAM129BQ96TA1 746 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 OR2AG1Q9H205 316 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 RPF2Q9H7B2 306 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 UBAP1Q9NZ09 502 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GULP1Q9UBP9 304 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 TRANK1O15050 2925 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 HELZP42694 1942 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 KCNE1BA0A087WTH5 132 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 SLC5A10A0PJK1 596 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 EME2A4GXA9 379 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 H0Y858 1186 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 H3BM21 787 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 PSMD11O00231 422 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 IFRD1O00458 451 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 HNRNPRO43390 633 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 PSIP1O75475 530 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 SOD1P00441 154 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CATP04040 527 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 IL6P05231 212 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 C6P13671 934 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 ADRB3P13945 408 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms