RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 LAMP2P13473 410 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 ATP6V1B2P21281 511 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 CLNS1AP54105 237 aaKnown RBP17.86■□□□□ 0.45
CCDC43-201ENST00000315286 AQP4P55087 323 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 NAE1Q13564 534 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 GRAMD1BQ3KR37 738 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 NANOGP8Q6NSW7 305 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 DLEU7Q6UYE1 221 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 THOC6Q86W42 341 aaKnown RBP17.86■□□□□ 0.45
CCDC43-201ENST00000315286 ZNF547Q8IVP9 402 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 SLCO4A1Q96BD0 722 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 ELSPBP1Q96BH3 223 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 TMEM74Q96NL1 305 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 PKP4Q99569 1192 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 NANOGQ9H9S0 305 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 AP4S1Q9Y587 144 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 CROCCQ5TZA2 2017 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 DRD3P35462 400 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 USP39Q53GS9 565 aaKnown RBP17.86■□□□□ 0.45
CCDC43-201ENST00000315286 CACHD1Q5VU97 1274 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 XKR5Q6UX68 686 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 PLA2G15Q8NCC3 412 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 ATL1Q8WXF7 558 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 RAB7BQ96AH8 199 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 FOPNLQ96NB1 174 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 ASIC5Q9NY37 505 aa17.86■□□□□ 0.45
CCDC43-201ENST00000315286 DOCK9Q9BZ29 2069 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 IFRD1O00458 451 aaPredicted RBP17.85■□□□□ 0.45
CCDC43-201ENST00000315286 STAMBPO95630 424 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 SLC16A8O95907 504 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 NPPAP01160 153 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 APODP05090 189 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 BCKDHAP12694 445 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 ZNF8P17098 575 aaPredicted RBP17.85■□□□□ 0.45
CCDC43-201ENST00000315286 CD22P20273 847 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 GRIA3P42263 894 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 SOX9P48436 509 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 GSK3BP49841 420 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 IRF8Q02556 426 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 ITPRIPL2Q3MIP1 535 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 FAM46CQ5VWP2 391 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 CHPFQ8IZ52 775 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 PLCD3Q8N3E9 789 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 KRTCAP2Q8N6L1 136 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 ZUFSPQ96AP4 578 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 MED8Q96G25 268 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 DUS3LQ96G46 650 aaKnown RBP17.85■□□□□ 0.45
CCDC43-201ENST00000315286 DPY30Q9C005 99 aa17.85■□□□□ 0.45
CCDC43-201ENST00000315286 GRXCR2A6NFK2 248 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 LIN7AO14910 233 aaPredicted RBP17.84■□□□□ 0.45
CCDC43-201ENST00000315286 MID1O15344 667 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 JUPP14923 745 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 IMPA1P29218 277 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 PLIN5Q00G26 463 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 LIPEQ05469 1076 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 BNIP2Q12982 314 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 SPATS1Q496A3 300 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 FRG2Q64ET8 278 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 IFNEQ86WN2 208 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 TMEM126BQ8IUX1 230 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 HID1Q8IV36 788 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 RNF175Q8N4F7 328 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 AADATQ8N5Z0 425 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 TMEM102Q8N9M5 508 aaPredicted RBP17.84■□□□□ 0.45
CCDC43-201ENST00000315286 OR2T34Q8NGX1 318 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 OR2T3Q8NH03 318 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 CLHC1Q8NHS4 586 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 FRG2BQ96QU4 278 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 OR4K3Q96R72 315 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 ZBTB18Q99592 522 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 ALG2Q9H553 416 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 CLEC1BQ9P126 229 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 DLGAP4Q9Y2H0 992 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 DTNAQ9Y4J8 743 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 E7EQ34 232 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 CLGNO14967 610 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 POP7O75817 140 aaKnown RBP17.84■□□□□ 0.45
CCDC43-201ENST00000315286 C1orf105O95561 183 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 SLC7A1P30825 629 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 MAPK9P45984 424 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 TAS2R38P59533 333 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 DLX2Q07687 328 aaPredicted RBP17.84■□□□□ 0.45
CCDC43-201ENST00000315286 GTF2H3Q13889 308 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 FAM174BQ3ZCQ3 159 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 XKR6Q5GH73 641 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 LIPJQ5W064 366 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 CES5AQ6NT32 575 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 IRGCQ6NXR0 463 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 CRTC3Q6UUV7 619 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 SPPL2CQ8IUH8 684 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 PPM1MQ96MI6 270 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 TRMT61BQ9BVS5 477 aaKnown RBP17.84■□□□□ 0.45
CCDC43-201ENST00000315286 S1PR5Q9H228 398 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 TMEM98Q9Y2Y6 226 aa17.84■□□□□ 0.45
CCDC43-201ENST00000315286 PCYT1BQ9Y5K3 369 aaPredicted RBP17.84■□□□□ 0.45
CCDC43-201ENST00000315286 IGLON5A6NGN9 336 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 ZNF839A8K0R7 811 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 PRPH2P23942 346 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 KLC1Q07866 573 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 ENPP2Q13822 863 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms