RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ARMC6Q6NXE6 501 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 ZNF449Q6P9G9 518 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 SPESP1Q6UW49 350 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 PRSS42Q7Z5A4 293 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 DTX1Q86Y01 620 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 DCUN1D3Q8IWE4 304 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 CTAGE3PQ8IX95 158 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 PPM1NQ8N819 430 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 BBOF1Q8ND07 529 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 KCNE4Q8WWG9 221 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 LINGO1Q96FE5 620 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 TAAR9Q96RI9 348 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 FGF21Q9NSA1 209 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 UTP6Q9NYH9 597 aaKnown RBP11.63□□□□□ -0.55
SCFD1-201ENST00000311943 PILRAQ9UKJ1 303 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 VWA7Q9Y334 891 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 PTPRQQ9UMZ3 2332 aa11.63□□□□□ -0.55
SCFD1-201ENST00000311943 A0A087WV48 116 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 FAM95CA0A1B0GW59 222 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 HMX2A2RU54 273 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 TLCD2A6NGC4 264 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 CDC7O00311 574 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 RASGRF2O14827 1237 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 VPS26AO75436 327 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 PSIP1O75475 530 aaKnown RBP11.62□□□□□ -0.55
SCFD1-201ENST00000311943 KIAA0754O94854 1291 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ACSL3O95573 720 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 GSTM1P09488 218 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 FDXRP22570 491 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 RAB28P51157 221 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 GSTM4Q03013 218 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 PRKAA1Q13131 559 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 BMPR2Q13873 1038 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ATP1A1-AS1Q5TC04 95 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 CMC1Q7Z7K0 106 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 LSMEM2Q8N112 164 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 OR1L3Q8NH93 324 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ASB11Q8WXH4 323 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 INPP5DQ92835 1189 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 NKD1Q969G9 470 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ZBTB9Q96C00 473 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 VPS39Q96JC1 886 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 TSSK1BQ9BXA7 367 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 PITPNM3Q9BZ71 974 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 TWSG1Q9GZX9 223 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 SPRTNQ9H040 489 aaPredicted RBP11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ATG10Q9H0Y0 220 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 CDC42EP4Q9H3Q1 356 aaKnown RBP11.62□□□□□ -0.55
SCFD1-201ENST00000311943 SEMA5BQ9P283 1151 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCFD1-201ENST00000311943 TRMT6Q9UJA5 497 aaKnown RBP11.62□□□□□ -0.55
SCFD1-201ENST00000311943 SLC39A10Q9ULF5 831 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 V9GYY5 206 aaPredicted RBP11.62□□□□□ -0.55
SCFD1-201ENST00000311943 LOC101059948A0A1B0GTJ6 334 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 FAM159BA6NKW6 160 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 C2orf74A8MZ97 194 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 SMAPO00193 183 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 STK17BO94768 372 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 SHMT2P34897 504 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 CBLBQ13191 982 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 DCAF12Q5T6F0 453 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ARHGAP40Q5TG30 622 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 FCRL6Q6DN72 434 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 IGF2-ASQ6U949 168 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 UNC5DQ6UXZ4 953 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 PLD3Q8IV08 490 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 RASGRP3Q8IV61 690 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 D2HGDHQ8N465 521 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 GALNT6Q8NCL4 622 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ZNF248Q8NDW4 579 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 OR2A1Q8NGT9 310 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ZNF480Q8WV37 535 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ZFPM2Q8WW38 1151 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 PYCR2Q96C36 320 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ZNF501Q96CX3 271 aaPredicted RBP11.62□□□□□ -0.55
SCFD1-201ENST00000311943 ULBP3Q9BZM4 244 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 EPB41L1Q9H4G0 881 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 IL17BQ9UHF5 180 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 PDE10AQ9Y233 779 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 PCDHGA7Q9Y5G6 932 aa11.62□□□□□ -0.55
SCFD1-201ENST00000311943 IGKV1-8A0A0C4DH67 115 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 TMEM8BA6NDV4 472 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 FOXO6A8MYZ6 492 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 B4E171 279 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 TMX2-CTNND1H3BSU7 103 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 GFYI3L273 518 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 CTSVO60911 334 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 SPAG6O75602 509 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 TSPAN7P41732 249 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 GABRA4P48169 554 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 HSD11B2P80365 405 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 NFKB2Q00653 900 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 SF1Q15637 639 aaKnown RBP11.61□□□□□ -0.55
SCFD1-201ENST00000311943 CLPPQ16740 277 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-201ENST00000311943 UBE2R2Q712K3 238 aaPredicted RBP11.61□□□□□ -0.55
SCFD1-201ENST00000311943 LMNTD2Q8IXW0 634 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 ALKBH8Q96BT7 664 aaKnown RBP11.61□□□□□ -0.55
SCFD1-201ENST00000311943 SLC6A20Q9NP91 592 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 FBXO8Q9NRD0 319 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms