RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 GRK5P34947 590 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 RPP38P78345 283 aaKnown RBP14.35□□□□□ -0.11
COL6A2-202ENST00000310645 ATAD3CQ5T2N8 411 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 NXNL2Q5VZ03 156 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 PRRT2Q7Z6L0 340 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-202ENST00000310645 UMODL1-AS1Q8N2C9 162 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 TTYH2Q9BSA4 534 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 OR7A17O14581 309 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 TFECO14948 347 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-202ENST00000310645 TSPAN12O95859 305 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 POMCP01189 267 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 HLA-DPA1P20036 260 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 MRPL19P49406 292 aaKnown RBP14.35□□□□□ -0.11
COL6A2-202ENST00000310645 KIAA0040Q15053 153 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 DDR2Q16832 855 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 SPANXN2Q5MJ10 180 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 AGAP6Q5VW22 663 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 CCDC71Q8IV32 467 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-202ENST00000310645 GPR152Q8TDT2 470 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 CEP19Q96LK0 163 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 AGAP4Q96P64 663 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 CDADC1Q9BWV3 514 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 TRIM39Q9HCM9 518 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 CCNB1IP1Q9NPC3 277 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 FKBPLQ9UIM3 349 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 PCDHGB6Q9Y5F9 930 aa14.35□□□□□ -0.11
COL6A2-202ENST00000310645 PAPPA2Q9BXP8 1791 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 DSCR3O14972 297 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 SERPINF2P08697 491 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 OR1E1P30953 314 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 PPP3CCP48454 512 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 ZFP69Q49AA0 526 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 ZC3H12BQ5HYM0 836 aaKnown RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 PRAMEF19Q5SWL8 479 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 ARTNQ5T4W7 220 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CACHD1Q5VU97 1274 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CHPFQ8IZ52 775 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 ASCC1Q8N9N2 400 aaKnown RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 PPP3R2Q96LZ3 170 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 ZBED2Q9BTP6 218 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 SPON2Q9BUD6 331 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CLDN24A6NM45 220 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 HAT1O14929 419 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 KMOO15229 486 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 SNAI1O95863 264 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 FAM189BP81408 668 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 DAB2P98082 770 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 ACVR1Q04771 509 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 FAM214AQ32MH5 1076 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CAPN13Q6MZZ7 669 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 ZCCHC8Q6NZY4 707 aaKnown RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 PNCKQ6P2M8 343 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TCAIMQ8N3R3 496 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 IL17RDQ8NFM7 739 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 FBLIM1Q8WUP2 373 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TSSK3Q96PN8 268 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 KCNC2Q96PR1 638 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TMEM246Q9BRR3 403 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 PLSCR3Q9NRY6 295 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 WBP11Q9Y2W2 641 aaKnown RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 A0A1W2PQ67 120 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 GRXCR2A6NFK2 248 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 M0R082 166 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 WBP4O75554 376 aaKnown RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 RETP07949 1114 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TBX4P57082 545 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TUBA1BP68363 451 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TYSND1Q2T9J0 566 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 BCL7AQ4VC05 210 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 MS4A13Q5J8X5 152 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 SNAP47Q5SQN1 464 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 DOK6Q6PKX4 331 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 SUSD1Q6UWL2 747 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TUBA1AQ71U36 451 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CFAP52Q8N1V2 620 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CD200R1Q8TD46 325 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TPD52L3Q96J77 140 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CENPOQ9BU64 300 aa14.34□□□□□ -0.11
COL6A2-202ENST00000310645 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-202ENST00000310645 CENPXA8MT69 81 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 CTDSP2O14595 271 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 RGS5O15539 181 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 TLL1O43897 1013 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 RHOQP17081 205 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 HOXA9P31269 272 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 MC4RP32245 332 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 IDH2P48735 452 aaKnown RBP14.33□□□□□ -0.12
COL6A2-202ENST00000310645 SMUG1Q53HV7 270 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 KIAA1614Q5VZ46 1190 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 FBXL22Q6P050 247 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 NEDD4LQ96PU5 975 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 ZNF490Q9ULM2 529 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-202ENST00000310645 ZSWIM8A7E2V4 1837 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 LOC110117498-PIK3R3F6TDL0 507 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 CCRL2O00421 344 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 IFRD1O00458 451 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-202ENST00000310645 RGS13O14921 159 aa14.33□□□□□ -0.12
COL6A2-202ENST00000310645 AZGP1P25311 298 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms