RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 CDK4P11802 303 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 GNALP38405 381 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ARCN1P48444 511 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 MANFP55145 182 aaKnown RBP8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PER3P56645 1201 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 CCDC58Q4VC31 144 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 ALG1LQ6GMV1 187 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 OTOP2Q7RTS6 562 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 DGLUCYQ7Z3D6 616 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC44A1Q8WWI5 657 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 TAPBPLQ9BX59 468 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 NANSQ9NR45 359 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 NPAP1Q9NZP6 1156 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 PCDHGC3Q9UN70 934 aa8.18□□□□□ -1.1
PPARGC1B-201ENST00000309241 KRBA1A5PL33 1030 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 OR1D2P34982 312 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 CNTN2Q02246 1040 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 HID1Q8IV36 788 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 CADM2Q8N3J6 435 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 CPSF7Q8N684 471 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ZNF548Q8NEK5 533 aaPredicted RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 PMM1Q92871 262 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 NPAS2Q99743 824 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MECRQ9BV79 373 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 RNF121Q9H920 327 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ANKRD34BA5PLL1 514 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 EFCAB9A8MZ26 197 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 OR10H3O60404 316 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 DSC3Q14574 896 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 CYP1B1Q16678 543 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 AAK1Q2M2I8 961 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 BRMS1LQ5PSV4 323 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 NEPROQ6NW34 567 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MSANTD2Q6P1R3 559 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ZNF227Q86WZ6 799 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 DNAJC18Q9H819 358 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 PTGFRNQ9P2B2 879 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 RIIAD1A6NNX1 92 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 PIAS1O75925 651 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 NRIP1P48552 1158 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MAP2K5Q13163 448 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC13A2Q13183 592 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 RNASE12Q5GAN4 147 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ARSKQ6UWY0 536 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 GCNT7Q6ZNI0 430 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MSANTD1Q6ZTZ1 278 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 OR2T12Q8NG77 320 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MAFIPQ8WZ33 124 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 RIOX1Q9H6W3 641 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ZNF536O15090 1300 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 CNOT1A5YKK6 2376 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 LIASO43766 372 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC19A2O60779 497 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 GABRR2P28476 465 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 CDKL1Q00532 357 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 SPIBQ01892 262 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 LAPTM4BQ86VI4 370 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 TRUB1Q8WWH5 349 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 LCN9Q8WX39 176 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 FOLH1BQ9HBA9 442 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 HEBP2Q9Y5Z4 205 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 TTC3P53804 2025 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 A8MU76 341 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ACKR2O00590 384 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 NUAK1O60285 661 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 LRATO95237 230 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 IDSP22304 550 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 KLRK1P26718 216 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 EEFSECP57772 596 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 DEFA6Q01524 100 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 OC90Q02509 493 aaPredicted RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 CAPN13Q6MZZ7 669 aaPredicted RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 FIP1L1Q6UN15 594 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 OR5T2Q8NGG2 359 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 DPEP2Q9H4A9 486 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 SAMHD1Q9Y3Z3 626 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 C1orf167Q5SNV9 1468 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ARL6IP5O75915 188 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 AP2A2O94973 939 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 FOXN2P32314 431 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 ATP4BP51164 291 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MAPK14Q16539 360 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 SLC44A3Q8N4M1 653 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 PRELID2Q8N945 189 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 KAT5Q92993 513 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MOCS1Q9NZB8 636 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 KIAA1522Q9P206 1035 aaPredicted RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 AGO1Q9UL18 857 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 POMPQ9Y244 141 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 TEX51A0A1B0GUA7 166 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 SMCO3A2RU48 225 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 FAM86B2P0C5J1 330 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 RASGEF1BQ0VAM2 473 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 FSTL1Q12841 308 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 MMAAQ8IVH4 418 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 RAVER1Q8IY67 606 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 TAS1R2Q8TE23 839 aa8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 C7orf50Q9BRJ6 194 aaKnown RBP8.17□□□□□ -1.1
PPARGC1B-201ENST00000309241 WRAP53Q9BUR4 548 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms