RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 CHAF1BQ13112 559 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 NOLC1Q14978 699 aaKnown RBP eCLIP1.21□□□□□ -2.22
CEP290-201ENST00000309041 ABCB5Q2M3G0 1257 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SPDYE7PQ495Y7 208 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ABHD17BQ5VST6 288 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ANGEL2Q5VTE6 544 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 LAIR1Q6GTX8 287 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PPP1R18Q6NYC8 613 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 KLHL35Q6PF15 583 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 APOA5Q6Q788 366 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PAQR3Q6TCH7 311 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SLC30A10Q6XR72 485 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ZNF365Q70YC5 407 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ARPINQ7Z6K5 226 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TMEM173Q86WV6 379 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 TGIF2LXQ8IUE1 241 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 AFAP1Q8N556 730 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 MAPKAPK5-AS1Q8N8E1 139 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 BANPQ8N9N5 519 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 Q8NA96 180 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 OR9A1PQ8NGU1 263 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 HASPINQ8TF76 798 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CHMP7Q8WUX9 453 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 UBLCP1Q8WVY7 318 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 GIMAP5Q96F15 307 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 CAPZA3Q96KX2 299 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RPRD1AQ96P16 312 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 FYTTD1Q96QD9 318 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 HIST1H4GQ99525 98 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 RAB11FIP5Q9BXF6 653 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 KRTAP4-5Q9BYR2 181 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TRIM4Q9C037 500 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 GPN1Q9HCN4 374 aaPredicted RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 ZDHHC18Q9NUE0 388 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 ATAD3AQ9NVI7 634 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 NCDNQ9UBB6 729 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 NXF1Q9UBU9 619 aaKnown RBP1.21□□□□□ -2.22
CEP290-201ENST00000309041 KLK13Q9UKR3 277 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SLC12A4Q9UP95 1085 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 PXDNLA1KZ92 1463 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 SCN7AQ01118 1682 aa1.21□□□□□ -2.22
CEP290-201ENST00000309041 TRBV7-9A0A0J9YWB2 115 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SH3D21A4FU49 640 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR4C45A6NMZ5 311 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 A8MXE2 369 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 PLPP3O14495 311 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CFLARO15519 480 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 WIPF1O43516 503 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PMPCBO75439 489 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SERPINI2O75830 405 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR6A2O95222 327 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC2A10O95528 541 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LDHBP07195 334 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 CCDC166P0CW27 439 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NELFEP18615 380 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 GNAT2P19087 354 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CD1BP29016 333 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PTPN7P35236 360 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 THBS4P35443 961 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IRS1P35568 1242 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IGFALSP35858 605 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RPL5P46777 297 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 RGS7P49802 495 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GSK3AP49840 483 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GUCA2AQ02747 115 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 HYAL1Q12794 435 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC10A2Q12908 348 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 IHHQ14623 411 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 EDRF1Q3B7T1 1238 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CEP55Q53EZ4 464 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GLRA4Q5JXX5 417 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 OTUD1Q5VV17 481 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 FAM173BQ6P4H8 233 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 WDR74Q6RFH5 385 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 FOXI2Q6ZQN5 318 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NFE4Q86UQ8 179 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CHD1LQ86WJ1 897 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GPALPP1Q8IXQ4 340 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SRBD1Q8N5C6 995 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 GVQW1Q8N7I0 195 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ARL14EPQ8N8R7 260 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR52E4Q8NGH9 312 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CCHCR1Q8TD31 782 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RPUSD4Q96CM3 377 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SAMD11Q96NU1 681 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TPSD1Q9BZJ3 242 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZYG11BQ9C0D3 744 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 WNT10AQ9GZT5 417 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 C6orf106Q9H6K1 298 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 ETNK1Q9HBU6 452 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GKN1Q9NS71 199 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 MRPL22Q9NWU5 206 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SMPD4Q9NXE4 827 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 DCAF16Q9NXF7 216 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 MTCH1Q9NZJ7 389 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CTSFQ9UBX1 484 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RSL24D1Q9UHA3 163 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 CNOT7Q9UIV1 285 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 FBXO9Q9UK97 447 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms