RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SYVN1Q86TM6 617 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 FOPNLQ96NB1 174 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 LRFN5Q96NI6 719 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 BIRC8Q96P09 236 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 DDX47Q9H0S4 455 aaKnown RBP16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 ASIC3Q9UHC3 531 aa16.43■□□□□ 0.22
HMGCLL1-202ENST00000308161 FAM237BA0A1B0GVD1 139 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 USP27XA6NNY8 438 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 H3BMM5 538 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 RASGRF2O14827 1237 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 DNAJB5O75953 348 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 ESR1P03372 595 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 CTSBP07858 339 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 NR1D1P20393 614 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 RORAP35398 523 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 FNTAP49354 379 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 CHAF1BQ13112 559 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 GRB7Q14451 532 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 SF1Q15637 639 aaKnown RBP16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 COLEC12Q5KU26 742 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 IZUMO3Q5VZ72 239 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 CENPUQ71F23 418 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 CILP2Q8IUL8 1156 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 DENND6AQ8IWF6 608 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZNF655Q8N720 491 aaPredicted RBP16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 MCUQ8NE86 351 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 OR2L8Q8NGY9 312 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 SEC14L1Q92503 715 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 RAD51AP1Q96B01 352 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 CAPZA3Q96KX2 299 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 TCF12Q99081 682 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 FBXO6Q9NRD1 293 aaPredicted RBP16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 C20orf96Q9NUD7 363 aaPredicted RBP16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 GALPQ9UBC7 116 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 NEU2Q9Y3R4 380 aa16.42■□□□□ 0.22
HMGCLL1-202ENST00000308161 MAGEB16A2A368 324 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 ARGFXA6NJG6 315 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 C9J4A7 227 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 MKRN2OSH3BPM6 223 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 SUV39H1O43463 412 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 RFPL1O75677 317 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 C1orf105O95561 183 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 HBQ1P09105 142 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 PKMP14618 531 aaKnown RBP16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 AGXTP21549 392 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 CTBP1Q13363 440 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 SLC9A5Q14940 896 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 UGT8Q16880 541 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 LACTB2Q53H82 288 aaPredicted RBP16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 CPZQ66K79 652 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 FAM198BQ6UWH4 519 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZNF517Q6ZMY9 492 aaPredicted RBP16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 PPIL6Q8IXY8 311 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 RAB42Q8N4Z0 105 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZBTB2Q8N680 514 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 NAT8LQ8N9F0 302 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 SLC22A18Q96BI1 424 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 MENTQ9BUN1 341 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 RAB11FIP5Q9BXF6 653 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 CCDC68Q9H2F9 335 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 TXLNGQ9NUQ3 528 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 DHCR7Q9UBM7 475 aaKnown RBP16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 PLCL2Q9UPR0 1127 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 TP53TG5Q9Y2B4 290 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 VPS9D1Q9Y2B5 631 aa16.41■□□□□ 0.22
HMGCLL1-202ENST00000308161 ZSCAN9O15535 394 aaPredicted RBP16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 SNRNP200O75643 2136 aaKnown RBP16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 S1PR4O95977 384 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 CBSLP0DN79 551 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 PSMB5P28074 263 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 CBSP35520 551 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 GRIA3P42263 894 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 GABRA4P48169 554 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 PMS2P54278 862 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 GNG11P61952 73 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 TSTA3Q13630 321 aaPredicted RBP16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 NCF4Q15080 339 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 ACSBG2Q5FVE4 666 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 MLIPQ5VWP3 458 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 SPNS2Q8IVW8 549 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 AGGF1Q8N302 714 aaeCLIP16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 NLNQ9BYT8 704 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 TRIM55Q9BYV6 548 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 INTS7Q9NVH2 962 aaKnown RBP16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 INTS10Q9NVR2 710 aaKnown RBP16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 TLK1Q9UKI8 766 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 TCFL5Q9UL49 500 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 MRFAP1Q9Y605 127 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 AP1M2Q9Y6Q5 423 aa16.4■□□□□ 0.22
HMGCLL1-202ENST00000308161 TENM4Q6N022 2769 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 ZCWPW2A0A1B0GU75 182 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 CES2O00748 559 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 USP1O94782 785 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 RECKO95980 971 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 RAB40ALP0C0E4 278 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 TCP1P17987 556 aaKnown RBP16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 CCNFP41002 786 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 SLC1A2P43004 574 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 PTGIRP43119 386 aa16.39■□□□□ 0.21
HMGCLL1-202ENST00000308161 CUL1Q13616 776 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms