RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PIM3Q86V86 326 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 KLHL6Q8WZ60 621 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC2A6Q9UGQ3 507 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 UTS2RQ9UKP6 389 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 POLR2AP24928 1970 aaKnown RBP10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 TOP3AQ13472 1001 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 OLIG2Q13516 323 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 PCBP2Q15366 365 aaKnown RBP eCLIP10.46□□□□□ -0.734e-11■■■■■ 46.3
SYNPO2-201ENST00000307142 TTMPQ5BVD1 217 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 EMC10Q5UCC4 262 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 PTCHD4Q6ZW05 846 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 CLDN19Q8N6F1 224 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 CMASQ8NFW8 434 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 EEF1AKMT1Q8WVE0 214 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 RORBQ92753 470 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC25A36Q96CQ1 311 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 R3HDMLQ9H3Y0 253 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC17A6Q9P2U8 582 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 RAB21Q9UL25 225 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 SH3GLB1Q9Y371 365 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 H0YGN5 161 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 CDC123O75794 336 aaPredicted RBP10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 CYP4B1P13584 511 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 OTX2P32243 289 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 BNIP2Q12982 314 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 GPR68Q15743 365 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 C11orf88Q6PI97 169 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 CPNE8Q86YQ8 564 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 UBE2J2Q8N2K1 259 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 DCAKDQ8WVC6 231 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC17A9Q9BYT1 436 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 CFL2Q9Y281 166 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 WASF2Q9Y6W5 498 aa10.46□□□□□ -0.73
SYNPO2-201ENST00000307142 G3V2T6 193 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 PIP5K1BO14986 540 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 PTX3P26022 381 aaPredicted RBP10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 RPL26P61254 145 aaKnown RBP10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 NDUFAF6Q330K2 333 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 TRPV1Q8NER1 839 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 SPRTNQ9H040 489 aaPredicted RBP10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 USP29Q9HBJ7 922 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 RPL26L1Q9UNX3 145 aaKnown RBP10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 SORCS3Q9UPU3 1222 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 CER1O95813 267 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 ALPPP05187 535 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 ZCCHC18P0CG32 403 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 CD70P32970 193 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 SCN7AQ01118 1682 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 PTPRCAPQ14761 206 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 NEDD8Q15843 81 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 EIPR1Q53HC9 387 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 C8orf59Q8N0T1 100 aaPredicted RBP10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 TFB2MQ9H5Q4 396 aaKnown RBP10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 NOL6Q9H6R4 1146 aaKnown RBP10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 C1orf109Q9NX04 203 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 PHF11Q9UIL8 331 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 IKZF2Q9UKS7 526 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 HCFC2Q9Y5Z7 792 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 OR5K4A6NMS3 321 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF726A6NNF4 738 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 VGLL3A8MV65 326 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 LILRB3O75022 631 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 CLUP10909 449 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 GLDCP23378 1020 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 GALNT2Q10471 571 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 ENPP2Q13822 863 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 NR0B2Q15466 257 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 BROXQ5VW32 411 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 CLNKQ7Z7G1 428 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 OR2T12Q8NG77 320 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC13A3Q8WWT9 602 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 XKR8Q9H6D3 395 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 GSTK1Q9Y2Q3 226 aa10.46□□□□□ -0.74
SYNPO2-201ENST00000307142 VSTM5A8MXK1 200 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 COQ9O75208 318 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 CLEC3AO75596 197 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TGDSO95455 350 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TAS2R39P59534 338 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC44A4Q53GD3 710 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ARL13AQ5H913 290 aaPredicted RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 PDZK1Q5T2W1 519 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TTC27Q6P3X3 843 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 PLXDC1Q8IUK5 500 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC5A11Q8WWX8 675 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TRNT1Q96Q11 434 aaKnown RBP10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TBC1D23Q9NUY8 699 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 PTGFRNQ9P2B2 879 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 U3KQV3 271 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 BBIP1A8MTZ0 92 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TRIM38O00635 465 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 NRP2O60462 931 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 C6P13671 934 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 CXCR1P25024 350 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 RANBP1P43487 201 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 ARMCX4Q5H9R4 360 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 TRABD2AQ86V40 505 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 FAR1Q8WVX9 515 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 DLGAP2Q9P1A6 1054 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 SCML1Q9UN30 329 aa10.45□□□□□ -0.74
SYNPO2-201ENST00000307142 C2orf71A6NGG8 1288 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms