RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SPATA16Q9BXB7 569 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 P2RY12Q9H244 342 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 SPATS2LQ9NUQ6 558 aaKnown RBP20.52■□□□□ 0.88
SMCO4-201ENST00000298966 CRYL1Q9Y2S2 319 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 PIKFYVEQ9Y2I7 2098 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 IGLV3-16A0A075B6K0 115 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 PRSS38A1L453 326 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 GMNCA6NCL1 334 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 NKX2-8O15522 239 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 RALBP11234 206 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 ETV4P43268 484 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 GPR3P46089 330 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 LDLRAP1Q5SW96 308 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 RBM20Q5T481 1227 aaKnown RBP20.51■□□□□ 0.87
SMCO4-201ENST00000298966 DCAF12Q5T6F0 453 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 RGS9BPQ6ZS82 235 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 TRIM42Q8IWZ5 723 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 OR4D9Q8NGE8 314 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 AP2M1Q96CW1 435 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 MAGEB18Q96M61 343 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 EFHD1Q9BUP0 239 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 GSDMCQ9BYG8 508 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 ABCG8Q9H221 673 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 WDR26Q9H7D7 661 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 GPN2Q9H9Y4 310 aaPredicted RBP20.51■□□□□ 0.87
SMCO4-201ENST00000298966 KLHL42Q9P2K6 505 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 NBPF19A0A087WUL8 3843 aa20.51■□□□□ 0.87
SMCO4-201ENST00000298966 A0A0U1RQS6 177 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 AP2A2O94973 939 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 KLHL2O95198 593 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 SLC35E2BP0CK96 405 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 PRKAR1AP10644 381 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 TEAD1P28347 426 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 TRIM23P36406 574 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 ETV3P41162 512 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 RAB15P59190 212 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 CDC20Q12834 499 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 ILF3Q12906 894 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMCO4-201ENST00000298966 PDAP1Q13442 181 aaKnown RBP20.5■□□□□ 0.87
SMCO4-201ENST00000298966 FAM83EQ2M2I3 478 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 ATP13A5Q4VNC0 1218 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 LACTB2Q53H82 288 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-201ENST00000298966 AGAP9Q5VTM2 703 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 KLC3Q6P597 504 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 ZNF549Q6P9A3 640 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 DDHD1Q8NEL9 900 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 RDH11Q8TC12 318 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 APOBEC4Q8WW27 367 aaKnown RBP20.5■□□□□ 0.87
SMCO4-201ENST00000298966 MIB2Q96AX9 1013 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 NUS1Q96E22 293 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 ABHD17AQ96GS6 310 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 BIRC8Q96P09 236 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 ZNF317Q96PQ6 595 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-201ENST00000298966 PANX3Q96QZ0 392 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 DPYSL5Q9BPU6 564 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 TSSK1BQ9BXA7 367 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 FAM96AQ9H5X1 160 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 CAB39LQ9H9S4 337 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 CARS2Q9HA77 564 aaKnown RBP20.5■□□□□ 0.87
SMCO4-201ENST00000298966 GPAMQ9HCL2 828 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 SLC17A7Q9P2U7 560 aa20.5■□□□□ 0.87
SMCO4-201ENST00000298966 B4E171 279 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 BIRC5O15392 142 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 DUX1O43812 170 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 WISP3O95389 354 aaPredicted RBP20.49■□□□□ 0.87
SMCO4-201ENST00000298966 FMO4P31512 558 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 TSPAN7P41732 249 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 CDKN1CP49918 316 aaPredicted RBP20.49■□□□□ 0.87
SMCO4-201ENST00000298966 KLRB1Q12918 225 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 PDK4Q16654 411 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 TAX1BP1Q86VP1 789 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 FAM129CQ86XR2 697 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 GDAP1Q8TB36 358 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 RAB3IL1Q8TBN0 382 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 CHMP6Q96FZ7 201 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 DCUN1D1Q96GG9 259 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 NDNQ99608 321 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 LGR4Q9BXB1 951 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 ZCCHC2Q9C0B9 1178 aaKnown RBP20.49■□□□□ 0.87
SMCO4-201ENST00000298966 MLXIPLQ9NP71 852 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 TAAR2Q9P1P5 351 aa20.49■□□□□ 0.87
SMCO4-201ENST00000298966 OAS3Q9Y6K5 1087 aaKnown RBP20.49■□□□□ 0.87
SMCO4-201ENST00000298966 EFCAB7A8K855 629 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 E5RI56 91 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 PHGDHO43175 533 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 LTA4HP09960 611 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 PRSS56P0CW18 603 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 THRAP10827 490 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 SAT1P21673 171 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 DEFB109BQ30KR1 87 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 NKAIN2Q5VXU1 208 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 ANKS6Q68DC2 871 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 PTRHD1Q6GMV3 140 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 PNCKQ6P2M8 343 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 CDHR3Q6ZTQ4 885 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 NRROSQ86YC3 692 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 CEP97Q8IW35 865 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 NLGN4XQ8N0W4 816 aa20.48■□□□□ 0.87
SMCO4-201ENST00000298966 NKAPQ8N5F7 415 aaKnown RBP20.48■□□□□ 0.87
SMCO4-201ENST00000298966 NLGN4YQ8NFZ3 816 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms