RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 NODALQ96S42 347 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 PRDM8Q9NQV8 689 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 TMEM9Q9P0T7 183 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 ERVK-18Q9QC07 812 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 PPT2Q9UMR5 302 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 CFAP99D6REC4 459 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 ZSCAN9O15535 394 aaPredicted RBP23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 ATP6V1G1O75348 118 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 STK16O75716 305 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 HSPA14Q0VDF9 509 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 GPRC6AQ5T6X5 926 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 ACBD5Q5T8D3 534 aaPredicted RBP23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 EGFLAMQ63HQ2 1017 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 ARL10Q8N8L6 244 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 TERB1Q8NA31 727 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 MAGEE1Q9HCI5 957 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 SERHLQ9NQF3 203 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 C1orf109Q9NX04 203 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 SNX5Q9Y5X3 404 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 GLYATL1P3A0A0U1RQE8 302 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 IL6P05231 212 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 ITGALP20701 1170 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 ACRV1P26436 265 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 RPS14P62263 151 aaKnown RBP23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 OR4F3Q6IEY1 312 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 APIPQ96GX9 242 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 APOLD1Q96LR9 279 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 PRM3Q9NNZ6 103 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 FUOMA2VDF0 154 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 SLC28A1O00337 649 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 MTX2O75431 263 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 S100A3P33764 101 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 TGFBR1P36897 503 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 TPGS1Q6ZTW0 290 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 CHST9Q7L1S5 443 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 SNX20Q7Z614 316 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 VTCN1Q7Z7D3 282 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 GPR26Q8NDV2 337 aa23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 DPH2Q9BQC3 489 aaPredicted RBP23.8■■□□□ 1.4
SPTSSA-201ENST00000298130 GRXCR2A6NFK2 248 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 C16orf96A6NNT2 1141 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 BCKDKO14874 412 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 ITPKAP23677 461 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 RPIAP49247 311 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 PRR23BQ6ZRT6 265 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 LRRC8DQ7L1W4 858 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 GPR149Q86SP6 731 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 ADHFE1Q8IWW8 467 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 ARL14EPQ8N8R7 260 aaPredicted RBP23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 PLD4Q96BZ4 506 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 ALOXE3Q9BYJ1 711 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 IFRD1O00458 451 aaPredicted RBP23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 SCELO95171 688 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 EMX1Q04741 257 aaPredicted RBP23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 FOXD4Q12950 439 aaPredicted RBP23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 TXNDC8Q6A555 127 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 KIAA1841Q6NSI8 718 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 CERS6Q6ZMG9 384 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 PJA1Q8NG27 643 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 KLF16Q9BXK1 252 aaPredicted RBP23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 TRNAU1APQ9NX07 287 aaKnown RBP23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 CD84Q9UIB8 345 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 C3orf18Q9UK00 162 aa23.79■■□□□ 1.4
SPTSSA-201ENST00000298130 H7C4K7 107 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 HPRP00739 348 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 MYCP01106 439 aaPredicted RBP23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 BCL2L1Q07817 233 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 CDK5R2Q13319 367 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 ZDHHC21Q8IVQ6 265 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 OR5K1Q8NHB7 308 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 MCOLN3Q8TDD5 553 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 ATG10Q9H0Y0 220 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 FRMPD3Q5JV73 1810 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 ZBBXA8MT70 800 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 CLDN9O95484 217 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 CHPFQ8IZ52 775 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 CPPED1Q9BRF8 314 aaPredicted RBP23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 VN1R3Q9BXE9 311 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 RASSF1Q9NS23 344 aa23.78■■□□□ 1.4
SPTSSA-201ENST00000298130 CASP8AP2Q9UKL3 1982 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 NPIPB15A6NHN6 443 aaPredicted RBP23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 TRBC1P01850 177 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 ZNF691Q5VV52 312 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 TRIM46Q7Z4K8 759 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 VRK3Q8IV63 474 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 NDNFQ8TB73 568 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 AUTS2Q8WXX7 1259 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 BBS2Q9BXC9 721 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 ELOVL6Q9H5J4 265 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 TRBV5-3A0A0A0MS03 114 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 ANGPTL1O95841 491 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 STK19P49842 368 aaPredicted RBP23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 VBP1P61758 197 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 ZCCHC8Q6NZY4 707 aaKnown RBP23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 ZCCHC7Q8N3Z6 543 aaKnown RBP23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 AADATQ8N5Z0 425 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 MUL1Q969V5 352 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 SCLYQ96I15 445 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 PYURFQ96I23 114 aa23.77■■□□□ 1.4
SPTSSA-201ENST00000298130 CWH43Q9H720 699 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms