RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 FADS2P1A8MWK0 482 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 FXYD1O00168 92 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 CDC7O00311 574 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 NME4O00746 187 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 ATG13O75143 517 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 PCDH8O95206 1070 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 C7P10643 843 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 CAPN3P20807 821 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 AOAHP28039 575 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 CCR3P51677 355 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 CDKL1Q00532 357 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 TMEM115Q12893 351 aaPredicted RBP16.39■□□□□ 0.21
CPSF4-201ENST00000292476 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 RCAN2Q14206 197 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 GRB7Q14451 532 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 RPS6KA2Q15349 733 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 CDKL4Q5MAI5 379 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 INTS11Q5TA45 600 aaKnown RBP16.39■□□□□ 0.21
CPSF4-201ENST00000292476 AGBL4Q5VU57 503 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 PRR23BQ6ZRT6 265 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 NEK10Q6ZWH5 1172 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 AADATQ8N5Z0 425 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 GANCQ8TET4 914 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 LRTOMTQ8WZ04 291 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 FAM3CQ92520 227 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 SLC45A3Q96JT2 553 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 CNBD2Q96M20 576 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 ZNF382Q96SR6 550 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 C1QTNF7Q9BXJ2 289 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 SLC52A3Q9NQ40 469 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 RIC8BQ9NVN3 520 aa16.39■□□□□ 0.21
CPSF4-201ENST00000292476 KMT2EQ8IZD2 1858 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 CKAP5Q14008 2032 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 A0A1W2PP18 115 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 LRRC14BA6NHZ5 514 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 GIPC1O14908 333 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 VEGFDO43915 354 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 TFAP2AP05549 437 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 GPIP06744 558 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 ENO2P09104 434 aaPredicted RBP16.38■□□□□ 0.21
CPSF4-201ENST00000292476 MPC1LP0DKB6 136 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 FCGR1AP12314 374 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 ITGB6P18564 788 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 TEAD1P28347 426 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 ATXN3P54252 364 aaPredicted RBP16.38■□□□□ 0.21
CPSF4-201ENST00000292476 FOXA1P55317 472 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 C6orf52Q5T4I8 152 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 KIAA1161Q6NSJ0 714 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 PPP4R4Q6NUP7 873 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 METTL2BQ6P1Q9 378 aaKnown RBP16.38■□□□□ 0.21
CPSF4-201ENST00000292476 NEK5Q6P3R8 708 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 USP30Q70CQ3 517 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 CARM1Q86X55 608 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 SPNS2Q8IVW8 549 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 SLC15A3Q8IY34 581 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 GALNT4Q8N4A0 578 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 FAM131CQ96AQ9 280 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 HAUS8Q9BT25 410 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 FOXQ1Q9C009 403 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 COQ10BQ9H8M1 238 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 RDH14Q9HBH5 336 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 CD274Q9NZQ7 290 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 ZIM2Q9NZV7 527 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 RAPGEFL1Q9UHV5 662 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 FZD4Q9ULV1 537 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 OARD1Q9Y530 152 aa16.38■□□□□ 0.21
CPSF4-201ENST00000292476 A0A1W2PP55 124 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PI15O43692 258 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 NUAK1O60285 661 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 EEDO75530 441 aaKnown RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 C8GP07360 202 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 CCR7P32248 378 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 NR1H2P55055 460 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 RPS21P63220 83 aaKnown RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PLOD1Q02809 727 aaPredicted RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 LSAMPQ13449 338 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 TGFBIQ15582 683 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 LAYNQ6UX15 382 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 ADAMTSL4Q6UY14 1074 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PTRH1Q86Y79 214 aaKnown RBP16.37■□□□□ 0.21
CPSF4-201ENST00000292476 TMEM105Q8N8V8 129 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 MFSD2AQ8NA29 543 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 LRRC58Q96CX6 371 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 SHDQ96IW2 340 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 TRIM39Q9HCM9 518 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PREBQ9HCU5 417 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PTTG2Q9NZH5 202 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 COQ6Q9Y2Z9 468 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PCDHA9Q9Y5H5 950 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 SNX13Q9Y5W8 968 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 BPTFQ12830 3046 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 KANSL1LA0AUZ9 987 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PLK4O00444 970 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 PPP6CO00743 305 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 SLC16A5O15375 505 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 LINC00032P0C843 101 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 ACADMP11310 421 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 ATP6V1B2P21281 511 aa16.37■□□□□ 0.21
CPSF4-201ENST00000292476 IL10P22301 178 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms